Factsheet for VIT_19s0015g00840.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG98455	Soybean	nucleus	70.82	29.35
KRH46413	Soybean	nucleus	69.26	28.99
PGSC0003DMT400057532	Potato	nucleus	65.37	26.37
Bra026418.1-P	Field mustard	plastid	62.26	24.96
GSMUA_Achr7P20140_001	Banana	nucleus	57.2	24.54
Bra035594.1-P	Field mustard	nucleus	59.53	23.91
Solyc07g052110.2.1	Tomato	nucleus	65.37	23.8
AT5G55920.1	Thale cress	nucleus	63.03	23.75
Bra002867.1-P	Field mustard	mitochondrion, nucleus	59.53	23.22
KXG30856	Sorghum	nucleus, plastid	60.31	22.4
AT4G26600.5	Thale cress	plastid	61.09	22.36
Os02t0724600-01	Rice	nucleus	58.75	21.79
Os09t0551300-02	Rice	nucleus	59.14	21.75
Zm00001d017887_P004	Maize	plastid	59.53	20.84
Zm00001d051652_P003	Maize	plasma membrane	57.98	20.75
HORVU6Hr1G072030.1	Barley	plastid	57.59	19.58
TraesCS6D01G267300.1	Wheat	plastid	57.98	19.43
TraesCS6B01G315600.1	Wheat	plastid	57.59	19.37
TraesCS6A01G286600.1	Wheat	nucleus	57.98	19.28
VIT_19s0015g00650.t01	Wine grape	plastid	20.62	10.1
VIT_04s0008g01480.t01	Wine grape	plastid	17.12	8.66
VIT_07s0191g00040.t01	Wine grape	nucleus	24.51	7.53
CDY06532	Canola	cytosol	9.34	6.42
CDY17518	Canola	cytosol	4.28	5.37
CDX91690	Canola	cytosol, plastid	4.28	5.37
CDY65896	Canola	nucleus	4.28	4.82
CDY62126	Canola	cytosol	4.28	4.8
VIT_19s0015g00830.t01	Wine grape	nucleus	2.72	1.94
KRH75188	Soybean	cytosol	0.0	0.0

Protein Annotations

MapMan:17.1.2.2.3.6	Gene3D:3.40.50.150	ProteinID:CCB62028	ProteinID:CCB62028.1	UniProt:F6I573	EMBL:FN596747
InterPro:Fmu/NOL1/Nop2p_CS	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0006139	GO:GO:0006364	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0008757	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740
GO:GO:0032259	GO:GO:0055085	InterPro:IPR001678	InterPro:MeTrfase_RsmB/NOP2	PFAM:PF01189	PRINTS:PR02008
ScanProsite:PS01153	PFscan:PS51686	PANTHER:PTHR22807	PANTHER:PTHR22807:SF30	InterPro:RCMT	InterPro:SAM-dependent_MTases
SUPFAM:SSF53335	UniParc:UPI000210A8C0	ArrayExpress:VIT_19s0015g00840	EnsemblPlantsGene:VIT_19s0015g00840	EnsemblPlants:VIT_19s0015g00840.t01	RefSeq:XP_002266863
RefSeq:XP_002266863.2	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr19:+:8945634..8949898

Molecular Weight (calculated)

28696.2 Da

IEP (calculated)

10.045

GRAVY (calculated)

-0.948

Length

257 amino acids

Sequence
(BLAST)

001: MGVTNTVVCN YDGKELPKVL GHNTVDRVLL DAPCSGTGVI SKDESVKTSK SLEDIQKCAH LQKQLILAAI DMVDANSKSG GYIVYSTCSI MIPENEAVID
101: YALKKRNVKL VPCGLDFGRP GFTRFREHRF HQSLEKTRRF YPHVHNMDGF FVAKLKKMSN SKPNPTPSEP SEVEEQAPEE NDSDSELNMG EKTQQHPGKR
201: GTKKEKTQQH PGKRGTKKEN GGLKNAAPEN GKKESPSTTT KRKKRKFPSR EEISKAR

Best Arabidopsis Sequence Match ( AT4G26600.1 )
(BLAST)

001: MAALTRNKKK GSNSQTPPLN KQTKASPLKK AAKTQKPPLK KQRKCISEKK PLKKPEVSTD EEEEEEENEQ SDEGSESGSD LFSDGDEEGN NDSDDDDDDD
101: DDDDDDDEDA EPLAEDFLDG SDNEEVTMGS DLDSDSGGSK LERKSRAIDR KRKKEVQDAD DEFKMNIKEK PDEFQLPTQK ELEEEARRPP DLPSLQMRIR
201: EIVRILSNFK DLKPKGDKHE RNDYVGQLKA DLSSYYGYNE FLIGTLIEMF PVVELMELIE AFEKKRPTSI RTNTLKTRRR DLADILLNRG VNLDPLSKWS
301: KVGLIVYDSQ VPIGATPEYL AGFYMLQSAS SFLPVMALAP REKERVVDMA AAPGGKTTYV AALMKNTGII YANEMKVPRL KSLSANLHRM GVTNTIVCNY
401: DGRELTKVLG QSSVDRVLLD APCSGTGVIS KDESVKTSKS ADDIKKFAHL QKQLILGAID LVDANSKTGG YIVYSTCSVM IPENEAVIDY ALKNRDVKLV
501: PCGLDFGRPG FSSFREHRFH PSLEKTRRFY PHVHNMDGFF VAKLKKMSNA MQPSGNDEPA VTMEQAQVSS SDDDDEKAEA IEELEKPPVA SGQPKRESNT
601: KEDTNKRKNP RSKEIHKGKR NKNTKTESGN VEEPRKQKKK RSQWKNEIAQ AREEKRKTMR ENAKETPKHR G

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:TAIR;Acc:AT4G26600]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.