Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX91690 | Canola | cytosol, plastid | 86.03 | 96.1 |
| CDY65896 | Canola | nucleus | 93.45 | 93.86 |
| CDY17518 | Canola | cytosol | 83.84 | 93.66 |
| VIT_19s0015g00830.t01 | Wine grape | nucleus | 56.33 | 35.83 |
| KRH75188 | Soybean | cytosol | 44.54 | 32.59 |
| CDY06550 | Canola | nucleus | 74.67 | 27.01 |
| CDY06532 | Canola | cytosol | 43.23 | 26.47 |
| CDY68035 | Canola | nucleus | 74.67 | 26.43 |
| CDY28628 | Canola | nucleus | 71.18 | 24.89 |
| CDY17367 | Canola | mitochondrion, nucleus | 70.31 | 24.07 |
| CDX94307 | Canola | plastid | 62.45 | 22.45 |
| CDX89321 | Canola | plastid | 62.01 | 22.22 |
| KRH46413 | Soybean | nucleus | 57.21 | 21.34 |
| KRG98455 | Soybean | nucleus | 57.64 | 21.29 |
| PGSC0003DMT400057532 | Potato | nucleus | 57.21 | 20.57 |
| GSMUA_Achr7P20140_001 | Banana | nucleus | 50.66 | 19.37 |
| Solyc07g052110.2.1 | Tomato | nucleus | 57.21 | 18.56 |
| KXG30856 | Sorghum | nucleus, plastid | 48.91 | 16.18 |
| Zm00001d051652_P003 | Maize | plasma membrane | 48.91 | 15.6 |
| Os09t0551300-02 | Rice | nucleus | 47.6 | 15.59 |
| Os02t0724600-01 | Rice | nucleus | 47.16 | 15.58 |
| Zm00001d017887_P004 | Maize | plastid | 49.34 | 15.4 |
| HORVU6Hr1G072030.1 | Barley | plastid | 46.72 | 14.15 |
| TraesCS6B01G315600.1 | Wheat | plastid | 46.72 | 14.01 |
| TraesCS6D01G267300.1 | Wheat | plastid | 46.72 | 13.95 |
| TraesCS6A01G286600.1 | Wheat | nucleus | 46.72 | 13.84 |
| CDY15291 | Canola | nucleus | 5.68 | 8.39 |
| CDY24205 | Canola | plastid | 15.28 | 6.73 |
| CDY43364 | Canola | plastid | 15.28 | 6.69 |
| CDY24989 | Canola | plastid | 13.97 | 6.54 |
| CDY05536 | Canola | plastid | 13.54 | 6.34 |
| CDY19785 | Canola | plastid | 12.66 | 5.99 |
| CDX87063 | Canola | plastid | 12.23 | 5.79 |
| CDY66223 | Canola | mitochondrion | 5.24 | 4.71 |
| CDX85924 | Canola | cytosol | 2.62 | 4.62 |
| CDY28964 | Canola | cytosol | 2.62 | 4.48 |
| VIT_19s0015g00840.t01 | Wine grape | nucleus | 4.8 | 4.28 |
| CDX69365 | Canola | cytosol | 9.17 | 2.9 |
| CDY68255 | Canola | cytosol, mitochondrion | 8.73 | 2.8 |
| CDX89460 | Canola | nucleus | 8.73 | 2.56 |
| CDY25593 | Canola | nucleus | 8.73 | 2.52 |
| CDX76928 | Canola | nucleus | 8.73 | 2.48 |
| CDY13765 | Canola | nucleus | 8.73 | 2.47 |
Protein Annotations
| EnsemblPlants:CDY62126 | EnsemblPlantsGene:GSBRNA2T00035982001 | Gene3D:3.30.70.1170 | GO:A0A078J6M8 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0016740 | GO:GO:0032259 | InterPro:RCMT_NOP2 |
| PANTHER:PTHR22807 | PANTHER:PTHR22807:SF30 | PRINTS:PR02012 | ProteinID:CDY62126 | ProteinID:CDY62126.1 | SEG:seg |
| UniParc:UPI0004EE23D1 | UniProt:A0A078J6M8 | MapMan:35.2 | : | : | : |
Description
BnaC08g47350DBnaC08g47350D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J6M8]
Coordinates
chrLK034102:-:18304..19388
Molecular Weight (calculated)
25890.8 Da
IEP (calculated)
4.677
GRAVY (calculated)
-0.473
Length
229 amino acids
Sequence
(BLAST)
(BLAST)
001: MASQLPAMYS SSQTIFIDRA KAKEEEDADA EHLGFNKEVG PSEESEHDTF RLPTEEELEE ESRGPPDLPL PQSRIKEIVR ALSNFNGLRP KGASRKDCAE
101: QLKSDLASYY GYSLLIGTLF ELFLPVELME IKLMEIIDAF DKQRPSSIWT NTLKTRRRDL ADVLLNRGVN PDPLSKWSKL GLVVYDSQVP IGATPEYLAG
201: YYMVSDLLTR ACSDFGKPVM SRKEEHLWG
101: QLKSDLASYY GYSLLIGTLF ELFLPVELME IKLMEIIDAF DKQRPSSIWT NTLKTRRRDL ADVLLNRGVN PDPLSKWSKL GLVVYDSQVP IGATPEYLAG
201: YYMVSDLLTR ACSDFGKPVM SRKEEHLWG
001: MAALTRNKKK GSNSQTPPLN KQTKASPLKK AAKTQKPPLK KQRKCISEKK PLKKPEVSTD EEEEEEENEQ SDEGSESGSD LFSDGDEEGN NDSDDDDDDD
101: DDDDDDDEDA EPLAEDFLDG SDNEEVTMGS DLDSDSGGSK LERKSRAIDR KRKKEVQDAD DEFKMNIKEK PDEFQLPTQK ELEEEARRPP DLPSLQMRIR
201: EIVRILSNFK DLKPKGDKHE RNDYVGQLKA DLSSYYGYNE FLIGTLIEMF PVVELMELIE AFEKKRPTSI RTNTLKTRRR DLADILLNRG VNLDPLSKWS
301: KVGLIVYDSQ VPIGATPEYL AGFYMLQSAS SFLPVMALAP REKERVVDMA AAPGGKTTYV AALMKNTGII YANEMKVPRL KSLSANLHRM GVTNTIVCNY
401: DGRELTKVLG QSSVDRVLLD APCSGTGVIS KDESVKTSKS ADDIKKFAHL QKQLILGAID LVDANSKTGG YIVYSTCSVM IPEVGEPYFF CSTIFFSWHL
501: HVFSLVLFVQ QIMQNEAVID YALKNRDVKL VPCGLDFGRP G
101: DDDDDDDEDA EPLAEDFLDG SDNEEVTMGS DLDSDSGGSK LERKSRAIDR KRKKEVQDAD DEFKMNIKEK PDEFQLPTQK ELEEEARRPP DLPSLQMRIR
201: EIVRILSNFK DLKPKGDKHE RNDYVGQLKA DLSSYYGYNE FLIGTLIEMF PVVELMELIE AFEKKRPTSI RTNTLKTRRR DLADILLNRG VNLDPLSKWS
301: KVGLIVYDSQ VPIGATPEYL AGFYMLQSAS SFLPVMALAP REKERVVDMA AAPGGKTTYV AALMKNTGII YANEMKVPRL KSLSANLHRM GVTNTIVCNY
401: DGRELTKVLG QSSVDRVLLD APCSGTGVIS KDESVKTSKS ADDIKKFAHL QKQLILGAID LVDANSKTGG YIVYSTCSVM IPEVGEPYFF CSTIFFSWHL
501: HVFSLVLFVQ QIMQNEAVID YALKNRDVKL VPCGLDFGRP G
Arabidopsis Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:TAIR;Acc:AT4G26600]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.