Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY28964 | Canola | cytosol | 96.15 | 93.28 |
| CDY66223 | Canola | mitochondrion | 93.08 | 47.45 |
| Bra022117.1-P | Field mustard | cytosol | 60.77 | 42.02 |
| KRH14216 | Soybean | cytosol | 59.23 | 26.55 |
| CDY24205 | Canola | plastid | 94.62 | 23.65 |
| CDY43364 | Canola | plastid | 94.62 | 23.52 |
| AT3G13180.1 | Thale cress | plastid | 87.69 | 21.8 |
| PGSC0003DMT400076617 | Potato | cytosol, plastid | 70.77 | 16.7 |
| KRH73916 | Soybean | plastid | 68.46 | 16.67 |
| VIT_19s0015g00650.t01 | Wine grape | plastid | 66.92 | 16.57 |
| Solyc12g015710.1.1 | Tomato | cytosol | 68.46 | 15.78 |
| TraesCS5B01G251800.1 | Wheat | mitochondrion, plastid | 60.77 | 14.34 |
| TraesCS5A01G253000.1 | Wheat | mitochondrion, plastid | 60.77 | 14.34 |
| TraesCS5D01G260700.1 | Wheat | mitochondrion | 60.77 | 13.88 |
| GSMUA_Achr3P10750_001 | Banana | plastid | 60.0 | 13.78 |
| OQU89660 | Sorghum | plastid | 60.0 | 13.59 |
| HORVU5Hr1G071070.1 | Barley | plastid | 60.0 | 13.54 |
| Os09t0477900-01 | Rice | mitochondrion, plastid | 58.46 | 13.33 |
| CDY05536 | Canola | plastid | 24.62 | 6.54 |
| CDY24989 | Canola | plastid | 24.62 | 6.54 |
| CDY19785 | Canola | plastid | 23.85 | 6.4 |
| CDX87063 | Canola | plastid | 23.85 | 6.4 |
| CDY06550 | Canola | nucleus | 30.77 | 6.32 |
| CDY68035 | Canola | nucleus | 30.77 | 6.18 |
| CDY17367 | Canola | mitochondrion, nucleus | 31.54 | 6.13 |
| CDX94307 | Canola | plastid | 30.0 | 6.12 |
| CDY28628 | Canola | nucleus | 30.77 | 6.11 |
| CDX89321 | Canola | plastid | 30.0 | 6.1 |
| CDY68255 | Canola | cytosol, mitochondrion | 23.85 | 4.34 |
| CDX69365 | Canola | cytosol | 23.85 | 4.28 |
| CDX89460 | Canola | nucleus | 24.62 | 4.09 |
| CDY25593 | Canola | nucleus | 24.62 | 4.04 |
| CDX76928 | Canola | nucleus | 23.85 | 3.84 |
| CDY13765 | Canola | nucleus | 23.85 | 3.83 |
| CDX91690 | Canola | cytosol, plastid | 4.62 | 2.93 |
| CDY17518 | Canola | cytosol | 4.62 | 2.93 |
| CDY65896 | Canola | nucleus | 4.62 | 2.63 |
| CDY62126 | Canola | cytosol | 4.62 | 2.62 |
| CDY06532 | Canola | cytosol | 6.15 | 2.14 |
| CDY15291 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| KEGG:00564+2.1.1.17 | Gene3D:3.40.50.150 | MapMan:35.2 | GO:A0A078DC33 | EnsemblPlants:CDX85924 | ProteinID:CDX85924 |
| ProteinID:CDX85924.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 |
| GO:GO:0016740 | EnsemblPlantsGene:GSBRNA2T00143756001 | InterPro:IPR001678 | InterPro:MeTrfase_RsmB/NOP2 | PFAM:PF01189 | PRINTS:PR02008 |
| PFscan:PS51686 | PANTHER:PTHR22807 | PANTHER:PTHR22807:SF53 | MetaCyc:PWY-6825 | InterPro:RCMT | InterPro:SAM-dependent_MTases |
| SUPFAM:SSF53335 | UniParc:UPI0004EE2D06 | : | : | : | : |
Description
BnaC06g22100D
Coordinates
chrLK031843:+:854386..855441
Molecular Weight (calculated)
14227.2 Da
IEP (calculated)
6.942
GRAVY (calculated)
0.098
Length
130 amino acids
Sequence
(BLAST)
(BLAST)
001: MYVNEGRLRI LGETAKSHQV AGLITTIHSD LRVFAETKEV QYDKLLLDAP CSGIGVLSKP GGFLIYSTCS IDPEENQGRV EAFLLRHPFS VDPVDRLVPS
101: SFVTSQGVFL SNPVKHSLDG AFAVRLVRAL
101: SFVTSQGVFL SNPVKHSLDG AFAVRLVRAL
001: MAQLLSFRVY LSAETQKASP GSFKRTQKTR KPFSPDRRGP VAPSRKSQNL NLEVSPHRAV SAVRLMRIEY GGAFADLLNE KGKGSGSNEM SYVERTIGFR
101: TRDLDDRDLR LVTDVVGGTI RWRRYLDHLI GSLCHNERTF RNMEPLLLQI LRIGVYEIIK RDMPPYAVVD ENVRLAKVAL RPGAGDFVNG ILRKLVSLKE
201: KDALPLPKVE GDDRAQARAL ATLHSHPVWM VRRWVKYLGL DEATKLMIWN NNDPGFSLRA NTGRDITRAD LVERLNSLKV PHELSLHLEE FVRIKTGLQT
301: VVQAGLLKEG ICSVQDESAG LIVSVVKPQP GERIMDACAA PGGKTLFMAS CLKGQGMIYA MDVNEGRLRI LGETAKSHQV DGLITTIHSD LRVFAETNEV
401: QYDKVLLDAP CSGLGVLSKR ADLRWNRKLE DMLELTKLQD ELLDSASKLV KHGGVLVYST CSIDPEENEG RVEAFLLRHP EFTIDPVTSF VPSSFVTSQG
501: FFLSNPVKHS LDGAFAARLV RAL
101: TRDLDDRDLR LVTDVVGGTI RWRRYLDHLI GSLCHNERTF RNMEPLLLQI LRIGVYEIIK RDMPPYAVVD ENVRLAKVAL RPGAGDFVNG ILRKLVSLKE
201: KDALPLPKVE GDDRAQARAL ATLHSHPVWM VRRWVKYLGL DEATKLMIWN NNDPGFSLRA NTGRDITRAD LVERLNSLKV PHELSLHLEE FVRIKTGLQT
301: VVQAGLLKEG ICSVQDESAG LIVSVVKPQP GERIMDACAA PGGKTLFMAS CLKGQGMIYA MDVNEGRLRI LGETAKSHQV DGLITTIHSD LRVFAETNEV
401: QYDKVLLDAP CSGLGVLSKR ADLRWNRKLE DMLELTKLQD ELLDSASKLV KHGGVLVYST CSIDPEENEG RVEAFLLRHP EFTIDPVTSF VPSSFVTSQG
501: FFLSNPVKHS LDGAFAARLV RAL
Arabidopsis Description
NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q8VYC4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.