Factsheet for HORVU5Hr1G071070.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G253000.1	Wheat	mitochondrion, plastid	89.76	93.83
TraesCS5D01G260700.1	Wheat	mitochondrion	92.01	93.15
TraesCS5B01G251800.1	Wheat	mitochondrion, plastid	89.06	93.1
Os09t0477900-01	Rice	mitochondrion, plastid	79.34	80.18
OQU89660	Sorghum	plastid	76.04	76.31
VIT_19s0015g00650.t01	Wine grape	plastid	60.94	66.86
HORVU6Hr1G034260.1	Barley	extracellular	7.99	66.67
AT3G13180.1	Thale cress	plastid	58.68	64.63
CDY24205	Canola	plastid	58.16	64.42
CDY43364	Canola	plastid	58.33	64.24
Bra039376.1-P	Field mustard	plastid	58.33	64.24
KRH73916	Soybean	plastid	58.16	62.73
PGSC0003DMT400076617	Potato	cytosol, plastid	58.68	61.34
CDY28964	Canola	cytosol	14.24	61.19
Solyc12g015710.1.1	Tomato	cytosol	59.9	61.17
GSMUA_Achr3P10750_001	Banana	plastid	59.72	60.78
CDX85924	Canola	cytosol	13.54	60.0
Bra022117.1-P	Field mustard	cytosol	17.71	54.26
CDY66223	Canola	mitochondrion	21.7	49.02
KRH14216	Soybean	cytosol	24.65	48.97
HORVU6Hr1G038870.11	Barley	cytosol	13.54	14.86
HORVU6Hr1G072030.1	Barley	plastid	17.88	13.62
HORVU4Hr1G010180.10	Barley	cytosol	12.67	10.1
HORVU5Hr1G070390.9	Barley	cytosol, nucleus, plastid	12.67	8.28

Protein Annotations

Gene3D:1.10.940.10	Gene3D:3.40.50.150	MapMan:35.2	UniProt:A0A287RQR2	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003824	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0006364
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008649	GO:GO:0009058	GO:GO:0009987
GO:GO:0016740	GO:GO:0031167	GO:GO:0032259	EnsemblPlantsGene:HORVU5Hr1G071070	EnsemblPlants:HORVU5Hr1G071070.1	InterPro:IPR001678
InterPro:IPR035926	InterPro:MeTrfase_RsmB/NOP2	InterPro:NusB-like_sf	InterPro:NusB_RsmB_TIM44	PFAM:PF01029	PFAM:PF01189
PRINTS:PR02008	PRINTS:PR02009	PFscan:PS51686	PANTHER:PTHR22807	PANTHER:PTHR22807:SF53	InterPro:RCMT
InterPro:RCMT_RsmB-rel_pln	InterPro:SAM-dependent_MTases	SUPFAM:SSF48013	SUPFAM:SSF53335	TIGRFAMs:TIGR00563	UniParc:UPI000B47FC6B
InterPro:rRNA_ssu_MeTfrase_B	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:532070616..532077379

Molecular Weight (calculated)

63746.6 Da

IEP (calculated)

7.341

GRAVY (calculated)

-0.226

Length

576 amino acids

Sequence
(BLAST)

001: SSSVAFVRSS SPCPLSPSTP LPPSKTPAEM EAKALPLSHF RARAGSPLLL SADASSAAPG RSRASRYDAG APPSRAEGRG GAWKRDDPEA PPRRTGTSKV
101: PIVNFEVSHH RAVAAVRLLR ADKGKAFVDL LNEKANDSGE NEMGYVERTL GFSTRHLDDR DIRLVTVIVA GTVRWKRYID YLIMSLCSEE KVFSNMEPLL
201: LQILRIGFYE ILKLNVPAYA VVDENVRLAK VALRPGAGNM VNAILRKLLL LKETDSLPLP KIEGDDRAQA RALSIIYSHP VWMVRRWIRF LGKEEALKLM
301: NWNNSDPYFS LRVNTTNGYT RDDLVTRLED LQVHYEKSIM DEFVRIREGM QAVLQAGLLK EGMCAVQDES AGFVVSVVDP QPGETIMDCC AAPGGKTLFM
401: ASRLAGQGKV SALDINKGRL RILMEAAKCH NLDDIITDIH GDLRLYAKES TTKYDKVLLD APCSGLGVLS KRADLRWNRQ LEDLEELVCL QDELLDSASL
501: LVKPGGVLIY STCSIDHEEN ENRVTDFVQR HPEFTLQGVH GYVPAEFITG DGFYSSSPTK HSLDGAFAAR LVRSMH

Best Arabidopsis Sequence Match ( AT3G13180.1 )
(BLAST)

001: MAQLLSFRVY LSAETQKASP GSFKRTQKTR KPFSPDRRGP VAPSRKSQNL NLEVSPHRAV SAVRLMRIEY GGAFADLLNE KGKGSGSNEM SYVERTIGFR
101: TRDLDDRDLR LVTDVVGGTI RWRRYLDHLI GSLCHNERTF RNMEPLLLQI LRIGVYEIIK RDMPPYAVVD ENVRLAKVAL RPGAGDFVNG ILRKLVSLKE
201: KDALPLPKVE GDDRAQARAL ATLHSHPVWM VRRWVKYLGL DEATKLMIWN NNDPGFSLRA NTGRDITRAD LVERLNSLKV PHELSLHLEE FVRIKTGLQT
301: VVQAGLLKEG ICSVQDESAG LIVSVVKPQP GERIMDACAA PGGKTLFMAS CLKGQGMIYA MDVNEGRLRI LGETAKSHQV DGLITTIHSD LRVFAETNEV
401: QYDKVLLDAP CSGLGVLSKR ADLRWNRKLE DMLELTKLQD ELLDSASKLV KHGGVLVYST CSIDPEENEG RVEAFLLRHP EFTIDPVTSF VPSSFVTSQG
501: FFLSNPVKHS LDGAFAARLV RAL

Arabidopsis Description

NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q8VYC4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.