Factsheet for Bra039376.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43364	Canola	plastid	99.43	99.43
AT3G13180.1	Thale cress	plastid	92.73	92.73
Bra022117.1-P	Field mustard	cytosol	26.77	74.47
VIT_19s0015g00650.t01	Wine grape	plastid	72.08	71.81
KRH73916	Soybean	plastid	72.08	70.6
PGSC0003DMT400076617	Potato	cytosol, plastid	72.66	68.97
Solyc12g015710.1.1	Tomato	cytosol	73.04	67.73
GSMUA_Achr3P10750_001	Banana	plastid	67.88	62.72
TraesCS5A01G253000.1	Wheat	mitochondrion, plastid	64.24	60.98
TraesCS5B01G251800.1	Wheat	mitochondrion, plastid	64.24	60.98
TraesCS5D01G260700.1	Wheat	mitochondrion	64.44	59.23
Os09t0477900-01	Rice	mitochondrion, plastid	63.67	58.42
HORVU5Hr1G071070.1	Barley	plastid	64.24	58.33
OQU89660	Sorghum	plastid	63.1	57.49
KRH14216	Soybean	cytosol	28.68	51.72
Bra035594.1-P	Field mustard	nucleus	21.22	17.34
Bra026418.1-P	Field mustard	plastid	21.03	17.16
Bra002867.1-P	Field mustard	mitochondrion, nucleus	20.65	16.39
Bra036564.1-P	Field mustard	mitochondrion	14.53	15.7
Bra020544.1-P	Field mustard	mitochondrion, plastid	14.53	15.54
Bra011816.1-P	Field mustard	cytosol, mitochondrion	14.53	10.64
Bra030242.1-P	Field mustard	nucleus	14.53	9.58
Bra038528.1-P	Field mustard	nucleus	14.34	9.26

Protein Annotations

Gene3D:1.10.940.10	Gene3D:3.40.50.150	MapMan:35.2	EnsemblPlantsGene:Bra039376	EnsemblPlants:Bra039376.1	EnsemblPlants:Bra039376.1-P
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0005488	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009058	GO:GO:0009987
GO:GO:0016740	GO:GO:0032259	InterPro:IPR001678	InterPro:IPR035926	UniProt:M4FE55	InterPro:MeTrfase_RsmB/NOP2
InterPro:NusB-like_sf	InterPro:NusB_RsmB_TIM44	PFAM:PF01029	PFAM:PF01189	PRINTS:PR02008	PRINTS:PR02009
PFscan:PS51686	PANTHER:PTHR22807	PANTHER:PTHR22807:SF53	InterPro:RCMT	InterPro:RCMT_RsmB-rel_pln	InterPro:SAM-dependent_MTases
SUPFAM:SSF48013	SUPFAM:SSF53335	UniParc:UPI000253E935	SEG:seg	:	:

Description

AT3G13180 (E=2e-269) | NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein

Coordinates

chrScaffold000164:-:186147..189290

Molecular Weight (calculated)

58443.0 Da

IEP (calculated)

9.554

GRAVY (calculated)

-0.224

Length

523 amino acids

Sequence
(BLAST)

001: MAQLLSFRVY LSAETQKASP ESFKRTQKTR KPFTPGQRGP VTPVRKPQNL NLEVSPHRAV SAVRLMRIEF GGAFADLLNE KGKGSGSNEM SYVERTIGFR
101: TRDLDDRDLR LVTDVVGGTI RWRRYLDHLI GSLCHNERTF RNMEPLLLQI LRIGFYEIIK LDMPAYAVVD ENVRLAKIAL RPGAGDLVNG ILRKLVSLKE
201: KDALPLPKVE GDDRAQARAL ATLHSHPVWM VRRWVKYLGL DEATKLMTWN NTDPGFSLRA NMGRGITRSD LVERLNSLKV PHELSLHLEE FVRIKTGLQM
301: VVQAGLLKEG ICSVQDESAG LVVSVVKPQP GDRILDACAA PGGKTLFMAS CLQRQGMIYA MDVNEGRLRI LGETAKSHQV NGLITTIHSD LRVFAETKEV
401: QYDKVLLDAP CSGLGVLSKR ADLRWNRKLE DMEELTKLQD ELLDSASKLV KPGGFLIYST CSIDPEENQG RVEAFLLRHP EFSVDPVDRL VPSSFATPQG
501: FFLSNPVKHS LDGAFAARLV RAL

Best Arabidopsis Sequence Match ( AT3G13180.1 )
(BLAST)

001: MAQLLSFRVY LSAETQKASP GSFKRTQKTR KPFSPDRRGP VAPSRKSQNL NLEVSPHRAV SAVRLMRIEY GGAFADLLNE KGKGSGSNEM SYVERTIGFR
101: TRDLDDRDLR LVTDVVGGTI RWRRYLDHLI GSLCHNERTF RNMEPLLLQI LRIGVYEIIK RDMPPYAVVD ENVRLAKVAL RPGAGDFVNG ILRKLVSLKE
201: KDALPLPKVE GDDRAQARAL ATLHSHPVWM VRRWVKYLGL DEATKLMIWN NNDPGFSLRA NTGRDITRAD LVERLNSLKV PHELSLHLEE FVRIKTGLQT
301: VVQAGLLKEG ICSVQDESAG LIVSVVKPQP GERIMDACAA PGGKTLFMAS CLKGQGMIYA MDVNEGRLRI LGETAKSHQV DGLITTIHSD LRVFAETNEV
401: QYDKVLLDAP CSGLGVLSKR ADLRWNRKLE DMLELTKLQD ELLDSASKLV KHGGVLVYST CSIDPEENEG RVEAFLLRHP EFTIDPVTSF VPSSFVTSQG
501: FFLSNPVKHS LDGAFAARLV RAL

Arabidopsis Description

NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q8VYC4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.