Factsheet for Bra002867.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

nucleus 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY17367	Canola	mitochondrion, nucleus	98.48	97.01
Bra035594.1-P	Field mustard	nucleus	81.49	83.91
AT5G55920.1	Thale cress	nucleus	73.44	70.97
Bra026418.1-P	Field mustard	plastid	66.31	68.17
VIT_19s0015g00830.t01	Wine grape	nucleus	34.14	62.5
KRH46413	Soybean	nucleus	56.45	60.59
KRG98455	Soybean	nucleus	56.75	60.32
VIT_19s0015g00840.t01	Wine grape	nucleus	23.22	59.53
PGSC0003DMT400057532	Potato	nucleus	55.99	57.93
GSMUA_Achr7P20140_001	Banana	nucleus	48.1	52.92
Solyc07g052110.2.1	Tomato	nucleus	55.99	52.27
KRH75188	Soybean	cytosol	24.73	52.08
Os02t0724600-01	Rice	nucleus	50.68	48.2
KXG30856	Sorghum	nucleus, plastid	50.38	47.98
Os09t0551300-02	Rice	nucleus	50.53	47.64
Zm00001d051652_P003	Maize	plasma membrane	50.38	46.24
Zm00001d017887_P004	Maize	plastid	50.53	45.37
HORVU6Hr1G072030.1	Barley	plastid	49.32	42.99
TraesCS6D01G267300.1	Wheat	plastid	49.32	42.37
TraesCS6A01G286600.1	Wheat	nucleus	49.47	42.17
TraesCS6B01G315600.1	Wheat	plastid	48.86	42.15
Bra022117.1-P	Field mustard	cytosol	6.68	23.4
Bra020544.1-P	Field mustard	mitochondrion, plastid	15.48	20.86
Bra039376.1-P	Field mustard	plastid	16.39	20.65
Bra036564.1-P	Field mustard	mitochondrion	14.87	20.25
Bra011816.1-P	Field mustard	cytosol, mitochondrion	14.87	13.73
Bra038528.1-P	Field mustard	nucleus	15.63	12.72
Bra030242.1-P	Field mustard	nucleus	15.02	12.48

Protein Annotations

MapMan:17.1.2.2.3.6	Gene3D:3.30.70.3130	Gene3D:3.40.50.150	EnsemblPlantsGene:Bra002867	EnsemblPlants:Bra002867.1	EnsemblPlants:Bra002867.1-P
ncoils:Coil	InterPro:Fmu/NOL1/Nop2p_CS	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824
GO:GO:0005488	GO:GO:0006139	GO:GO:0006364	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0008757	GO:GO:0009987	GO:GO:0016740	GO:GO:0032259	InterPro:IPR001678	UniProt:M4CF85
InterPro:MeTrfase_RsmB/NOP2	InterPro:Methyltr_RsmF_N	InterPro:Nop2p	PFAM:PF01189	PFAM:PF17125	PRINTS:PR02008
PRINTS:PR02012	ScanProsite:PS01153	PFscan:PS51686	PANTHER:PTHR22807	PANTHER:PTHR22807:SF30	InterPro:RCMT
InterPro:RCMT_NOP2	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	TIGRFAMs:TIGR00446	UniParc:UPI0002544673	SEG:seg

Description

AT5G55920 (E=1e-193) OLI2 | nucleolar protein, putative

Coordinates

chrA10:-:7058559..7062128

Molecular Weight (calculated)

73088.0 Da

IEP (calculated)

4.840

GRAVY (calculated)

-0.773

Length

659 amino acids

Sequence
(BLAST)

001: MVLTRSKKRV AKSQTPPLKR AEKPQSLALK RKAEKPQALA SKKGGAKSQK TPPLKKQKKE AVVEEDPSED DEEEVSDDAA ASTDVESDDG EEEGSNGLGS
101: SGFFSDDDGE ENDDDGEELL GDDFLEGSGD EEEHSDSGSG SDSDSDEGDI EKESKLIDEE EAKEEEDAKA ELLDFNKEAG DDAFRLPTEE ELEEEARGPP
201: DLPLLQSRIK EIVRALSNFS VLRPNGASRK DCVEQLKSDI ASYYGYNSFL IGALFELFPP VELMELIEAF EKQRPTSIRT NTLKTRRRDL ADVLLNRGVN
301: LDPLSKWSKV GLVVYDSQVP IGATPEYLSG FYMLQGASSF LPVMALAPQE NERIVDVAAA PGGKTTYVAA LMKNTGLIFA NEMKVPRLKS LTANLHRMGV
401: TNTIVCNYDG RELPKVLGEK SVDRVLLDAP CSGTGVISKD ESVKVSKSLE EIKKFAHLQK QLLLAAIDMV DATSKTGGFI VYSTCSLMVA ENEAVIDYAL
501: KKRSVQLVKT GLDFGQDGFV RFREHRFHPS LNKTKRFYPH VHNMDGFFVA KLKKMSNMKQ ASEDDDEALG TVDEADVPSD DDEAEAMEEM EKPKKTKESK
601: EGLAKSKESK KGKKSKSKKG EDPPKIKKQR KNRTEMRMEI SQAREEKRKA MREKSKEKQ

Best Arabidopsis Sequence Match ( AT5G55920.1 )
(BLAST)

001: MPALTRNKKK AATKSITPPT KQLTKSKTPP MKPQTSMLKK GAKSQNKPPL KKQKKEVVEE EPLEDYEVTD DSDEDDEVSD GSDEDDISPA VESEEIDESD
101: DGENGSNQLF SDDEEENDEE TLGDDFLEGS GDEDEEGSLD ADSDADSDDD DIVAKSDAID RDLAMQKKDA AAELEDFIKQ DDVHDEEPEH DAFRLPTEEE
201: LEEEARGPPD LPLLKTRIEE IVRALKNFKA FRPKDTTRKA CVEQLKADLG SYYGYNSFLI GTLVEMFPPG ELMELIEAFE KQRPTSIRTN TLKTRRRDLA
301: DVLLNRGVNL DPLSKWSKVG LVIYDSQVPI GATPEYLAGY YMLQGASSFL PVMALAPREN ERIVDVAAAP GGKTTYIAAL MKNTGLIYAN EMKVPRLKSL
401: TANLHRMGVT NTIVCNYDGR ELPKVLGQNT VDRVLLDAPC SGTGIISKDE SVKITKTMDE IKKFAHLQKQ LLLAAIDMVD ANSKTGGYIV YSTCSIMVTE
501: NEAVIDYALK KRDVKLVTCG LDFGRKGFTR FREHRFQPSL DKTRRFYPHV HNMDGFFVAK LKKMSNVKQS SEEGDDDAVE TVEQAEVSSD DDDEAEAIEE
601: TEKPSVPVRQ PKERKEKKNK EKLAKSKEDK RGKKDKKSKS ENVEEPSKPR KQKKKRREWK NEIAQAREEK RIAMREKAKE EK

Arabidopsis Description

OLI2Nucleolar protein-like [Source:UniProtKB/TrEMBL;Acc:Q9FG73]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.