CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

nucleus 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra002867.1-P	Field mustard	mitochondrion, nucleus	97.01	98.48
CDY28628	Canola	nucleus	96.11	98.17
CDY68035	Canola	nucleus	81.32	84.08
CDY06550	Canola	nucleus	79.07	83.57
AT5G55920.1	Thale cress	nucleus	72.65	71.26
CDY62126	Canola	cytosol	24.07	70.31
CDX91690	Canola	cytosol, plastid	21.52	70.24
CDX89321	Canola	plastid	65.47	68.54
CDX94307	Canola	plastid	65.17	68.45
CDY65896	Canola	nucleus	23.32	68.42
CDY17518	Canola	cytosol	20.33	66.34
CDY06532	Canola	cytosol	29.75	53.21
GSMUA_Achr7P20140_001	Banana	nucleus	47.38	52.92
Os02t0724600-01	Rice	nucleus	50.07	48.34
Os09t0551300-02	Rice	nucleus	50.07	47.93
KXG30856	Sorghum	nucleus, plastid	49.48	47.83
Zm00001d051652_P003	Maize	plasma membrane	49.33	45.96
Zm00001d017887_P004	Maize	plastid	49.63	45.23
HORVU6Hr1G072030.1	Barley	plastid	48.88	43.25
TraesCS6D01G267300.1	Wheat	plastid	48.73	42.5
TraesCS6B01G315600.1	Wheat	plastid	48.28	42.28
TraesCS6A01G286600.1	Wheat	nucleus	48.73	42.17
CDY28964	Canola	cytosol	6.43	32.09
CDX85924	Canola	cytosol	6.13	31.54
CDY66223	Canola	mitochondrion	9.27	24.31
CDY24205	Canola	plastid	16.29	20.96
CDY43364	Canola	plastid	16.29	20.84
CDY24989	Canola	plastid	15.1	20.65
CDY05536	Canola	plastid	15.1	20.65
CDY19785	Canola	plastid	14.8	20.45
CDX87063	Canola	plastid	14.65	20.25
CDX69365	Canola	cytosol	14.95	13.81
CDY68255	Canola	cytosol, mitochondrion	14.65	13.73
CDY15291	Canola	nucleus	3.14	13.55
CDX89460	Canola	nucleus	14.95	12.79
CDX76928	Canola	nucleus	15.4	12.76
CDY13765	Canola	nucleus	15.25	12.59
CDY25593	Canola	nucleus	14.8	12.48

Protein Annotations

KEGG:00564+2.1.1.17	MapMan:17.1.2.2.3.6	Gene3D:3.30.70.3130	GO:A0A078FXA1	UniProt:A0A078FXA1	EnsemblPlants:CDY17367
ProteinID:CDY17367	ProteinID:CDY17367.1	ncoils:Coil	InterPro:Fmu/NOL1/Nop2p_CS	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003824	GO:GO:0005488	GO:GO:0006139	GO:GO:0006364	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0008757	GO:GO:0009987	GO:GO:0016740	GO:GO:0032259
EnsemblPlantsGene:GSBRNA2T00095477001	InterPro:IPR001678	InterPro:MeTrfase_RsmB/NOP2	InterPro:Methyltr_RsmF_N	InterPro:Nop2p	PFAM:PF01189
PFAM:PF17125	PRINTS:PR02008	PRINTS:PR02012	ScanProsite:PS01153	PFscan:PS51686	PANTHER:PTHR22807
PANTHER:PTHR22807:SF30	MetaCyc:PWY-6825	InterPro:RCMT	InterPro:RCMT_NOP2	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335
TIGRFAMs:TIGR00446	UniParc:UPI0004EE8262	SEG:seg	:	:	:

Description

BnaA10g10010DBnaA10g10010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FXA1]

Coordinates

chrLK032072:-:527162..531035

Molecular Weight (calculated)

74200.3 Da

IEP (calculated)

4.875

GRAVY (calculated)

-0.781

Length

669 amino acids

Sequence
(BLAST)

001: MVLTRSKKRV AKSQTPPLKR AEKPQALALK RKAEKPQALA SKKGGAKSQK TPPLKKQKKE VFVEEDPSED DDEEVSDDAA ASTDVESEES DDGEEEGSNG
101: LGSSGFFSDD DGEENDDDDG EELLGDDFLE GSGDEEEHSG SGSDSDSDEG DIEKESKLID EEEAKEEEDA KAELLDFNKE AGDDAFRLPT EEELEEEARG
201: PPDLPLLQSR IKEIVRALSN FSVLRPNGAS RKDCVEQLKS DIASYYGYNS FLIGALFELF PPVELMELVE AFEKQRPTSI RTNTLKTRRR DLADVLLNRG
301: VNLDPLSKWS KVGLVVYDSQ VPIGATPEYL SGFYMLQGAS SFLPVMALAP QENERIVDVA AAPGGKTTYV AALMKNTGLI FANEMKVPRL KSLTANLHRM
401: GVTNTIVCNY DGRELPKVLG EKSVDRVLLD APCSGTGVIS KDESVKVSKS LEEIKKFAHL QKQLLLAAID MVDATSKTGG FIVYSTCSLM VAENEAVIDY
501: ALKKRSVQLV KTGLDFGQDG FVRFREHRFH PSLNKTKRFY PHVHNMDGFF VAKLKKMSNM KQASEDDDEA LGTVDEADVP SSDDEAEAME GMEKPSVPKK
601: QPKKTKESKE EGLAKSKESK KGKKSKSKKG EDPPKIKKQR KNRTEMRMEI SQAREEKRRA MREKSKEKQ

Best Arabidopsis Sequence Match ( AT5G55920.1 )
(BLAST)

001: MPALTRNKKK AATKSITPPT KQLTKSKTPP MKPQTSMLKK GAKSQNKPPL KKQKKEVVEE EPLEDYEVTD DSDEDDEVSD GSDEDDISPA VESEEIDESD
101: DGENGSNQLF SDDEEENDEE TLGDDFLEGS GDEDEEGSLD ADSDADSDDD DIVAKSDAID RDLAMQKKDA AAELEDFIKQ DDVHDEEPEH DAFRLPTEEE
201: LEEEARGPPD LPLLKTRIEE IVRALKNFKA FRPKDTTRKA CVEQLKADLG SYYGYNSFLI GTLVEMFPPG ELMELIEAFE KQRPTSIRTN TLKTRRRDLA
301: DVLLNRGVNL DPLSKWSKVG LVIYDSQVPI GATPEYLAGY YMLQGASSFL PVMALAPREN ERIVDVAAAP GGKTTYIAAL MKNTGLIYAN EMKVPRLKSL
401: TANLHRMGVT NTIVCNYDGR ELPKVLGQNT VDRVLLDAPC SGTGIISKDE SVKITKTMDE IKKFAHLQKQ LLLAAIDMVD ANSKTGGYIV YSTCSIMVTE
501: NEAVIDYALK KRDVKLVTCG LDFGRKGFTR FREHRFQPSL DKTRRFYPHV HNMDGFFVAK LKKMSNVKQS SEEGDDDAVE TVEQAEVSSD DDDEAEAIEE
601: TEKPSVPVRQ PKERKEKKNK EKLAKSKEDK RGKKDKKSKS ENVEEPSKPR KQKKKRREWK NEIAQAREEK RIAMREKAKE EK

Arabidopsis Description

OLI2Nucleolar protein-like [Source:UniProtKB/TrEMBL;Acc:Q9FG73]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.