Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY62126 | Canola | cytosol | 93.66 | 83.84 |
| CDY65896 | Canola | nucleus | 92.2 | 82.89 |
| CDX91690 | Canola | cytosol, plastid | 80.98 | 80.98 |
| VIT_19s0015g00830.t01 | Wine grape | nucleus | 52.68 | 30.0 |
| KRH75188 | Soybean | cytosol | 43.9 | 28.75 |
| CDY06532 | Canola | cytosol | 42.44 | 23.26 |
| CDY06550 | Canola | nucleus | 70.24 | 22.75 |
| CDY68035 | Canola | nucleus | 70.24 | 22.26 |
| CDY28628 | Canola | nucleus | 67.32 | 21.07 |
| CDY17367 | Canola | mitochondrion, nucleus | 66.34 | 20.33 |
| CDX94307 | Canola | plastid | 59.02 | 19.0 |
| CDX89321 | Canola | plastid | 58.54 | 18.78 |
| KRH46413 | Soybean | nucleus | 54.63 | 18.24 |
| KRG98455 | Soybean | nucleus | 55.12 | 18.23 |
| PGSC0003DMT400057532 | Potato | nucleus | 54.15 | 17.43 |
| GSMUA_Achr7P20140_001 | Banana | nucleus | 46.83 | 16.03 |
| Solyc07g052110.2.1 | Tomato | nucleus | 55.12 | 16.01 |
| KXG30856 | Sorghum | nucleus, plastid | 46.83 | 13.87 |
| Zm00001d051652_P003 | Maize | plasma membrane | 46.83 | 13.37 |
| Os09t0551300-02 | Rice | nucleus | 45.37 | 13.3 |
| Os02t0724600-01 | Rice | nucleus | 44.88 | 13.28 |
| Zm00001d017887_P004 | Maize | plastid | 46.83 | 13.08 |
| HORVU6Hr1G072030.1 | Barley | plastid | 45.37 | 12.3 |
| TraesCS6B01G315600.1 | Wheat | plastid | 45.37 | 12.17 |
| TraesCS6D01G267300.1 | Wheat | plastid | 45.37 | 12.13 |
| TraesCS6A01G286600.1 | Wheat | nucleus | 45.37 | 12.03 |
| CDY15291 | Canola | nucleus | 5.37 | 7.1 |
| CDY24205 | Canola | plastid | 16.1 | 6.35 |
| CDY43364 | Canola | plastid | 16.1 | 6.31 |
| CDY05536 | Canola | plastid | 12.2 | 5.11 |
| CDY24989 | Canola | plastid | 12.2 | 5.11 |
| CDY19785 | Canola | plastid | 11.22 | 4.75 |
| CDX85924 | Canola | cytosol | 2.93 | 4.62 |
| CDX87063 | Canola | plastid | 10.73 | 4.55 |
| CDY28964 | Canola | cytosol | 2.93 | 4.48 |
| VIT_19s0015g00840.t01 | Wine grape | nucleus | 5.37 | 4.28 |
| CDY66223 | Canola | mitochondrion | 4.88 | 3.92 |
| CDX69365 | Canola | cytosol | 9.27 | 2.62 |
| CDY68255 | Canola | cytosol, mitochondrion | 8.78 | 2.52 |
| CDX89460 | Canola | nucleus | 8.78 | 2.3 |
| CDY25593 | Canola | nucleus | 8.78 | 2.27 |
| CDX76928 | Canola | nucleus | 8.78 | 2.23 |
| CDY13765 | Canola | nucleus | 8.78 | 2.22 |
Protein Annotations
| EnsemblPlants:CDY17518 | EnsemblPlantsGene:GSBRNA2T00095721001 | Gene3D:3.30.70.1170 | GO:A0A078FYZ1 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | PANTHER:PTHR22807 | PANTHER:PTHR22807:SF30 | ProteinID:CDY17518 | ProteinID:CDY17518.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI0004EE9E31 | UniProt:A0A078FYZ1 | MapMan:35.2 | : | : |
Description
BnaC03g65450DBnaC03g65450D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FYZ1]
Coordinates
chrLK032074:-:547743..548828
Molecular Weight (calculated)
23418.0 Da
IEP (calculated)
4.615
GRAVY (calculated)
-0.428
Length
205 amino acids
Sequence
(BLAST)
(BLAST)
001: MASQLPAMYS SSQTKFIDRA KAKKEEDADA EHLDFNKEVG PGEESEQDTF RLPTEEELEE ESRGPPDLPL PQSRIKEIVR ALTNFNGLFT LSFLLFQLFL
101: LVELMEIKLM EIIDAFDKQR PSSIWTNTLK TRRRDLTDVL LNRGVNPDPL SKWSKLGLVV YDSQVPIGAT PEYLAGYYMV SDLLTRACSD FGKPVMSRKE
201: EHLWG
101: LVELMEIKLM EIIDAFDKQR PSSIWTNTLK TRRRDLTDVL LNRGVNPDPL SKWSKLGLVV YDSQVPIGAT PEYLAGYYMV SDLLTRACSD FGKPVMSRKE
201: EHLWG
001: MAALTRNKKK GSNSQTPPLN KQTKASPLKK AAKTQKPPLK KQRKCISEKK PLKKPEVSTD EEEEEEENEQ SDEGSESGSD LFSDGDEEGN NDSDDDDDDD
101: DDDDDDDEDA EPLAEDFLDG SDNEEVTMGS DLDSDSGGSK LERKSRAIDR KRKKEVQDAD DEFKMNIKEK PDEFQLPTQK ELEEEARRPP DLPSLQMRIR
201: EIVRILSNFK DLKPKGDKHE RNDYVGQLKA DLSSYYGYNE FLIGTLIEMF PVVELMELIE AFEKKRPTSI RTNTLKTRRR DLADILLNRG VNLDPLSKWS
301: KVGLIVYDSQ VPIGATPEYL AGFYMLQSAS SFLPVMALAP REKERVVDMA AAPGGKTTYV AALMKNTGII YANEMKVPRL KSLSANLHRM GVTNTIVCNY
401: DGRELTKVLG QSSVDRVLLD APCSGTGVIS KDESVKTSKS ADDIKKFAHL QKQLILGAID LVDANSKTGG YIVYSTCSVM IPENEAVIDY ALKNRDVKLV
501: PCGLDFGRPG FSSFREHRFH PSLEKTRRFY PHVHNMDGFF VAKLKKMSNA MQPSGNDEPA VTMEQAQVSS SDDDDEKAEA IEELEKPPVA SGQPKRESNT
601: KEDTNKRKNP RSKEIHKGKR NKNTKTESGN VEEPRKQKKK RSQWKNEIAQ AREEKRKTMR ENAKETPKHR G
101: DDDDDDDEDA EPLAEDFLDG SDNEEVTMGS DLDSDSGGSK LERKSRAIDR KRKKEVQDAD DEFKMNIKEK PDEFQLPTQK ELEEEARRPP DLPSLQMRIR
201: EIVRILSNFK DLKPKGDKHE RNDYVGQLKA DLSSYYGYNE FLIGTLIEMF PVVELMELIE AFEKKRPTSI RTNTLKTRRR DLADILLNRG VNLDPLSKWS
301: KVGLIVYDSQ VPIGATPEYL AGFYMLQSAS SFLPVMALAP REKERVVDMA AAPGGKTTYV AALMKNTGII YANEMKVPRL KSLSANLHRM GVTNTIVCNY
401: DGRELTKVLG QSSVDRVLLD APCSGTGVIS KDESVKTSKS ADDIKKFAHL QKQLILGAID LVDANSKTGG YIVYSTCSVM IPENEAVIDY ALKNRDVKLV
501: PCGLDFGRPG FSSFREHRFH PSLEKTRRFY PHVHNMDGFF VAKLKKMSNA MQPSGNDEPA VTMEQAQVSS SDDDDEKAEA IEELEKPPVA SGQPKRESNT
601: KEDTNKRKNP RSKEIHKGKR NKNTKTESGN VEEPRKQKKK RSQWKNEIAQ AREEKRKTMR ENAKETPKHR G
Arabidopsis Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:TAIR;Acc:AT4G26600]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.