CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra036564.1-P	Field mustard	mitochondrion	98.55	98.55
CDX87063	Canola	plastid	95.45	95.45
CDY24989	Canola	plastid	87.19	86.3
CDY05536	Canola	plastid	86.57	85.69
AT5G26180.3	Thale cress	plastid	81.41	69.49
Solyc08g062560.2.1	Tomato	nucleus	59.09	62.17
PGSC0003DMT400021199	Potato	cytosol, plastid	60.74	61.12
VIT_04s0008g01480.t01	Wine grape	plastid	63.02	60.04
KRH52232	Soybean	nucleus	59.09	58.25
KRH61558	Soybean	nucleus	58.88	57.69
Os02t0217800-00	Rice	plastid	57.64	55.25
KXG29808	Sorghum	plastid	56.41	54.93
Zm00001d016374_P002	Maize	cytosol, plastid	56.2	54.62
TraesCS6A01G183400.2	Wheat	plastid	56.61	54.15
TraesCS6B01G213900.2	Wheat	plastid	56.61	54.15
TraesCS6D01G171500.1	Wheat	plastid	56.41	53.95
GSMUA_Achr5P24950_001	Banana	mitochondrion	55.17	52.05
HORVU6Hr1G038870.11	Barley	cytosol	54.75	50.48
Solyc08g062440.1.1	Tomato	endoplasmic reticulum	22.11	49.77
CDY28964	Canola	cytosol	6.82	24.63
CDX85924	Canola	cytosol	6.4	23.85
CDY66223	Canola	mitochondrion	9.5	18.04
CDY06532	Canola	cytosol	12.81	16.58
CDX94307	Canola	plastid	21.07	16.01
CDX89321	Canola	plastid	20.45	15.49
CDY06550	Canola	nucleus	20.04	15.32
CDY68035	Canola	nucleus	20.25	15.15
CDY28628	Canola	nucleus	20.45	15.11
CDY24205	Canola	plastid	16.12	15.0
CDY17367	Canola	mitochondrion, nucleus	20.45	14.8
CDY43364	Canola	plastid	15.91	14.72
CDX91690	Canola	cytosol, plastid	5.37	12.68
CDY62126	Canola	cytosol	5.99	12.66
CDY65896	Canola	nucleus	5.58	11.84
CDY15291	Canola	nucleus	3.72	11.61
CDY68255	Canola	cytosol, mitochondrion	16.94	11.48
CDX69365	Canola	cytosol	16.94	11.33
CDY17518	Canola	cytosol	4.75	11.22
CDX76928	Canola	nucleus	16.74	10.04
CDX89460	Canola	nucleus	16.12	9.97
CDY25593	Canola	nucleus	16.12	9.84
CDY13765	Canola	nucleus	16.32	9.75

Protein Annotations

KEGG:00564+2.1.1.17	Gene3D:3.30.70.1170	Gene3D:3.40.50.150	MapMan:35.2	GO:A0A078FZN1	UniProt:A0A078FZN1
EnsemblPlants:CDY19785	ProteinID:CDY19785	ProteinID:CDY19785.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0016740
GO:GO:0032259	EnsemblPlantsGene:GSBRNA2T00009533001	InterPro:IPR001678	InterPro:MeTrfase_RsmB/NOP2	PFAM:PF01189	PRINTS:PR02008
PFscan:PS51686	PANTHER:PTHR22807	PANTHER:PTHR22807:SF4	MetaCyc:PWY-6825	InterPro:RCMT	InterPro:SAM-dependent_MTases
SUPFAM:SSF53335	UniParc:UPI0004EE27D9	SEG:seg	:	:	:

Description

BnaA09g04380DBnaA09g04380D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FZN1]

Coordinates

chrLK032100:-:341039..343728

Molecular Weight (calculated)

53949.5 Da

IEP (calculated)

9.981

GRAVY (calculated)

-0.274

Length

484 amino acids

Sequence
(BLAST)

001: MARRKPNAPP KATRQPAKQK FSSAERSSLY ASREAAKVLG TVLRGDAERR AVASIKSLVF SPSVRNKRGT FALVCETLKH LTVIKEVLEI ANVLNSKWKR
101: QEPLVYIICY DILFGKEPPL IGDAEKFLMK RKDALVSSLA TLLARKKAET VDELLGVSQL NGPLKPRYVR VNTLKMDVDS AVHELGKLYK VQKDETVPDL
201: LVMPPGSDLH AHHLVKNGRI FLQGKGSAMV AAALEPEADW EVIDACAAPG NKTINLAALM KGQGKIIACE LNEERVKRLE QTIKLSGATN IEVFHGDFLG
301: LAPEDPSFAK VRAILLDPSC SGSGTITDRL DHLLPSHSAD NKNYDSIRLH KLAVFQKKAL AHALSFPQVE RVVYSTCSIH QIENEDVVSS VLPLASSLGF
401: ELGTPFPQWQ RRGLPVLAGS EHLLRMDPEE DKEGFFIALF TKTNKLDDLK SSEVSERECR RRRRQGHPFL WPKVFFRAWN GRMR

Best Arabidopsis Sequence Match ( AT5G26180.5 )
(BLAST)

001: MVARRNKPKA PLVKHRFSGG DSHKPKPPPA TKQPFSGVES HKPKTSPATK QKFSGVESHK PKTPPGKQRF SGAESRKPKT PPATKQKFSS LERSALYARR
101: EAANILRTVL RGDAERRAVA SIKSLVLSPS VRNKRGTFAL VCETLKYLTV IKDVLDIANV LNSKWKRQEP LVFIVCYDIL FGKDTPSIGD AEKFLMRHKE
201: ALLSGLATLL VRKKVDSVDQ LLGSKLTGHL KPRYVRVNTL KMDVDSAVQE LEKHYTVQKD ETVPDLLVLP PGSDLHAHRL VANGRIFLQG KASSMVAAAL
301: QPQAGWEVLD ACSAPGNKTI HLAALMEGQG KIIACELNEE RVKRLEHTIK LSGASNIEVC HGDFLGLNPK DPSFAKIRAI LLDPSCSGSG TITDRLDHLL
401: PSHSEDNNMN YDSMRLHKLA VFQKKALAHA LSFPKVERVV YSTCSIYQIE NEDVVSSVLP LASSLGFKLA TPFPQWQRRG LPVFAGSEHL LRMDPVEDKE
501: GFFIALFVRA NKLDNPKSSE LPDRVCRRRP KERTMQLHPY LCPKMFRAWS GTLHRLKTRF LLSRNGC

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8GYE8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.