CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 3
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d016374_P002	Maize	cytosol, plastid	93.36	93.17
TraesCS6B01G213900.2	Wheat	plastid	79.28	77.87
Os02t0217800-00	Rice	plastid	78.87	77.62
TraesCS6D01G171500.1	Wheat	plastid	78.67	77.27
TraesCS6A01G183400.2	Wheat	plastid	78.67	77.27
HORVU6Hr1G038870.11	Barley	cytosol	72.43	68.57
GSMUA_Achr5P24950_001	Banana	mitochondrion	61.97	60.04
Solyc08g062560.2.1	Tomato	nucleus	54.12	58.48
VIT_04s0008g01480.t01	Wine grape	plastid	59.15	57.87
PGSC0003DMT400021199	Potato	cytosol, plastid	55.13	56.96
CDY05536	Canola	plastid	55.94	56.85
Bra020544.1-P	Field mustard	mitochondrion, plastid	55.73	56.65
CDY19785	Canola	plastid	54.93	56.41
CDX87063	Canola	plastid	54.93	56.41
CDY24989	Canola	plastid	55.33	56.24
Bra036564.1-P	Field mustard	mitochondrion	54.33	55.79
KRH52232	Soybean	nucleus	51.91	52.55
KRH61558	Soybean	nucleus	51.71	52.02
AT5G26180.3	Thale cress	plastid	56.14	49.21
Solyc08g062440.1.1	Tomato	endoplasmic reticulum	17.5	40.47
OQU89660	Sorghum	plastid	16.3	14.11
KXG30856	Sorghum	nucleus, plastid	18.31	13.15
KXG25732	Sorghum	mitochondrion	15.09	8.88
EER96904	Sorghum	nucleus	15.29	8.7

Protein Annotations

Gene3D:3.30.70.1170	Gene3D:3.40.50.150	MapMan:35.2	UniProt:A0A194YNJ9	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0016740	GO:GO:0032259	InterPro:IPR001678	EnsemblPlants:KXG29808	ProteinID:KXG29808	ProteinID:KXG29808.1
InterPro:MeTrfase_RsmB/NOP2	PFAM:PF01189	PRINTS:PR02008	PFscan:PS51686	PANTHER:PTHR22807	PANTHER:PTHR22807:SF4
MetaCyc:PWY-6825	InterPro:RCMT	InterPro:SAM-dependent_MTases	EnsemblPlantsGene:SORBI_3004G092600	SUPFAM:SSF53335	UniParc:UPI0007F2FE40
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:7880601..7887501

Molecular Weight (calculated)

54982.3 Da

IEP (calculated)

10.216

GRAVY (calculated)

-0.326

Length

497 amino acids

Sequence
(BLAST)

001: MPPPPHQPKN RSRGPAPTGE NRRPQRRMAS RDAAERAAFF ARREAAAVLR RVLRGDATRR AAGSIKSLVY SPTVRNKRAT FALVCQTLKY LSILKEVLTS
101: SGILNSKWKK QEELVYVTTY DILFGQGIAV SGSVEQLIMQ QKDSLRTTLD KVCARRKVSC AEDLLGNKTA VKPKPRFLRV NTLKITTESV IEELNKIHMV
201: DKDDMIPDML VLPPGTDLHN HPLVTDGKVF LQGRASCMVA VALSPKPGWK VIDACAAPGN KTVHLAALMN GKGSIIACEL NKERAKTLQH TVRRSGANNI
301: QIVNGDFLEV DRNDPSYAEV RAILLDPSCS GSGISTERLD YLLPSHSRDN QDDASTSSRV MKLSAFQKKA LSHALSFPSV ERVVYSTCSI HQAENEDVVN
401: SVLPLATSLG FELATPFPQW HRRGLPVFQG SEHLLRTDPE DGLEGFFIAL FVRKEVGGTS EEPSEDATVE VRTKRVPGRR NGVRAFSSLR LSRMILW

Best Arabidopsis Sequence Match ( AT5G26180.5 )
(BLAST)

001: MVARRNKPKA PLVKHRFSGG DSHKPKPPPA TKQPFSGVES HKPKTSPATK QKFSGVESHK PKTPPGKQRF SGAESRKPKT PPATKQKFSS LERSALYARR
101: EAANILRTVL RGDAERRAVA SIKSLVLSPS VRNKRGTFAL VCETLKYLTV IKDVLDIANV LNSKWKRQEP LVFIVCYDIL FGKDTPSIGD AEKFLMRHKE
201: ALLSGLATLL VRKKVDSVDQ LLGSKLTGHL KPRYVRVNTL KMDVDSAVQE LEKHYTVQKD ETVPDLLVLP PGSDLHAHRL VANGRIFLQG KASSMVAAAL
301: QPQAGWEVLD ACSAPGNKTI HLAALMEGQG KIIACELNEE RVKRLEHTIK LSGASNIEVC HGDFLGLNPK DPSFAKIRAI LLDPSCSGSG TITDRLDHLL
401: PSHSEDNNMN YDSMRLHKLA VFQKKALAHA LSFPKVERVV YSTCSIYQIE NEDVVSSVLP LASSLGFKLA TPFPQWQRRG LPVFAGSEHL LRMDPVEDKE
501: GFFIALFVRA NKLDNPKSSE LPDRVCRRRP KERTMQLHPY LCPKMFRAWS GTLHRLKTRF LLSRNGC

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8GYE8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.