Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G183400.2 | Wheat | plastid | 98.62 | 98.62 |
| TraesCS6D01G171500.1 | Wheat | plastid | 98.22 | 98.22 |
| HORVU6Hr1G038870.11 | Barley | cytosol | 88.54 | 85.33 |
| Os02t0217800-00 | Rice | plastid | 80.63 | 80.79 |
| KXG29808 | Sorghum | plastid | 77.87 | 79.28 |
| Zm00001d016374_P002 | Maize | cytosol, plastid | 77.47 | 78.71 |
| GSMUA_Achr5P24950_001 | Banana | mitochondrion | 59.09 | 58.28 |
| Solyc08g062560.2.1 | Tomato | nucleus | 52.96 | 58.26 |
| CDY05536 | Canola | plastid | 55.34 | 57.26 |
| Bra020544.1-P | Field mustard | mitochondrion, plastid | 55.14 | 57.06 |
| CDY24989 | Canola | plastid | 54.94 | 56.85 |
| PGSC0003DMT400021199 | Potato | cytosol, plastid | 53.95 | 56.76 |
| CDY19785 | Canola | plastid | 54.15 | 56.61 |
| CDX87063 | Canola | plastid | 53.95 | 56.41 |
| Bra036564.1-P | Field mustard | mitochondrion | 53.95 | 56.41 |
| VIT_04s0008g01480.t01 | Wine grape | plastid | 56.52 | 56.3 |
| KRH52232 | Soybean | nucleus | 50.0 | 51.53 |
| KRH61558 | Soybean | nucleus | 49.8 | 51.01 |
| AT5G26180.3 | Thale cress | plastid | 55.53 | 49.56 |
| Solyc08g062440.1.1 | Tomato | endoplasmic reticulum | 17.0 | 40.0 |
| TraesCS5B01G251800.1 | Wheat | mitochondrion, plastid | 15.61 | 14.34 |
| TraesCS6B01G315600.1 | Wheat | plastid | 17.39 | 11.52 |
| TraesCS4B01G060400.1 | Wheat | mitochondrion, plastid | 14.82 | 9.0 |
| TraesCS5B01G247600.1 | Wheat | cytosol, mitochondrion | 14.82 | 8.59 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G213900.2 | EnsemblPlantsGene:TraesCS6B01G213900 | Gene3D:3.30.70.1170 | Gene3D:3.40.50.150 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0016740 | InterPro:IPR001678 | InterPro:MeTrfase_RsmB/NOP2 |
| InterPro:RCMT | InterPro:SAM-dependent_MTases | PANTHER:PTHR22807 | PANTHER:PTHR22807:SF4 | PFAM:PF01189 | PFscan:PS51686 |
| PRINTS:PR02008 | SEG:seg | SUPFAM:SSF53335 | TIGR:cd02440 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr6B:-:289176109..289182154
Molecular Weight (calculated)
55384.8 Da
IEP (calculated)
10.158
GRAVY (calculated)
-0.249
Length
506 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPPPKNRSH APAKAGQSRP PPRQPGRRMA SRDAGERAAF FARREAATVL RRVLRGDASK RSGGSIKSLV FSPSVRNKRA TFALVCQTLK YLPILKEVLA
101: SSGVFSSKWK KQEELVYVTA YDILFGQEIA VSGSVEEYIM LHKDTFRTAL QKICVKRKVS NVEDLLSEKT TVKPKPRFVR VNTLKTTTGS VIEVLSKMHK
201: VDKDDMVPDM LVLPPGTDMH KHPLVTDGKV FLQGKASCMV AAAVSPKPGW KVIDACAAPG NKTVHLAALM NGEGSIIACE LNKERAKTLQ HTVRRSGANN
301: IETVIGDFLN IDSNDPSYAE VRAILLDPSC SGSGISTERL DHLLPSHSID DQDDAGSSAR IRKLSAFQRK ALSHALSFPS VERLVYSTCS IHQAENEDVV
401: SSVLPLASSL GFELATPFPQ WRRRGLPVFY GAEHLLRTDP EDDLEGFFIA LFVRKAAAAD ALEPSEDGGA LGRKRKRACT TRSGGLRAFS SLRLSRMDVL
501: CSIWGI
101: SSGVFSSKWK KQEELVYVTA YDILFGQEIA VSGSVEEYIM LHKDTFRTAL QKICVKRKVS NVEDLLSEKT TVKPKPRFVR VNTLKTTTGS VIEVLSKMHK
201: VDKDDMVPDM LVLPPGTDMH KHPLVTDGKV FLQGKASCMV AAAVSPKPGW KVIDACAAPG NKTVHLAALM NGEGSIIACE LNKERAKTLQ HTVRRSGANN
301: IETVIGDFLN IDSNDPSYAE VRAILLDPSC SGSGISTERL DHLLPSHSID DQDDAGSSAR IRKLSAFQRK ALSHALSFPS VERLVYSTCS IHQAENEDVV
401: SSVLPLASSL GFELATPFPQ WRRRGLPVFY GAEHLLRTDP EDDLEGFFIA LFVRKAAAAD ALEPSEDGGA LGRKRKRACT TRSGGLRAFS SLRLSRMDVL
501: CSIWGI
001: MVARRNKPKA PLVKHRFSGG DSHKPKPPPA TKQPFSGVES HKPKTSPATK QKFSGVESHK PKTPPGKQRF SGAESRKPKT PPATKQKFSS LERSALYARR
101: EAANILRTVL RGDAERRAVA SIKSLVLSPS VRNKRGTFAL VCETLKYLTV IKDVLDIANV LNSKWKRQEP LVFIVCYDIL FGKDTPSIGD AEKFLMRHKE
201: ALLSGLATLL VRKKVDSVDQ LLGSKLTGHL KPRYVRVNTL KMDVDSAVQE LEKHYTVQKD ETVPDLLVLP PGSDLHAHRL VANGRIFLQG KASSMVAAAL
301: QPQAGWEVLD ACSAPGNKTI HLAALMEGQG KIIACELNEE RVKRLEHTIK LSGASNIEVC HGDFLGLNPK DPSFAKIRAI LLDPSCSGSG TITDRLDHLL
401: PSHSEDNNMN YDSMRLHKLA VFQKKALAHA LSFPKVERVV YSTCSIYQIE NEDVVSSVLP LASSLGFKLA TPFPQWQRRG LPVFAGSEHL LRMDPVEDKE
501: GFFIALFVRA NKLDNPKSSE LPDRVCRRRP KERTMQLHPY LCPKMFRAWS GTLHRLKTRF LLSRNGC
101: EAANILRTVL RGDAERRAVA SIKSLVLSPS VRNKRGTFAL VCETLKYLTV IKDVLDIANV LNSKWKRQEP LVFIVCYDIL FGKDTPSIGD AEKFLMRHKE
201: ALLSGLATLL VRKKVDSVDQ LLGSKLTGHL KPRYVRVNTL KMDVDSAVQE LEKHYTVQKD ETVPDLLVLP PGSDLHAHRL VANGRIFLQG KASSMVAAAL
301: QPQAGWEVLD ACSAPGNKTI HLAALMEGQG KIIACELNEE RVKRLEHTIK LSGASNIEVC HGDFLGLNPK DPSFAKIRAI LLDPSCSGSG TITDRLDHLL
401: PSHSEDNNMN YDSMRLHKLA VFQKKALAHA LSFPKVERVV YSTCSIYQIE NEDVVSSVLP LASSLGFKLA TPFPQWQRRG LPVFAGSEHL LRMDPVEDKE
501: GFFIALFVRA NKLDNPKSSE LPDRVCRRRP KERTMQLHPY LCPKMFRAWS GTLHRLKTRF LLSRNGC
Arabidopsis Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8GYE8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.