Factsheet for TraesCS5B01G247600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G256900.1	Wheat	cytosol	98.97	98.97
TraesCS5A01G249700.1	Wheat	cytosol	95.3	95.19
HORVU5Hr1G070390.9	Barley	cytosol, nucleus, plastid	89.81	88.89
Os09t0471900-01	Rice	nucleus	79.73	79.09
EER96904	Sorghum	nucleus	77.43	77.35
Zm00001d020810_P002	Maize	nucleus	76.4	75.03
KRH59299	Soybean	cytosol	24.51	67.3
GSMUA_Achr7P19120_001	Banana	nucleus	55.9	58.65
TraesCS4B01G060400.1	Wheat	mitochondrion, plastid	54.52	57.14
VIT_07s0191g00040.t01	Wine grape	nucleus	53.72	56.03
CDY68255	Canola	cytosol, mitochondrion	45.82	56.02
Bra011816.1-P	Field mustard	cytosol, mitochondrion	45.82	56.02
CDX89460	Canola	nucleus	50.06	55.88
KRH43150	Soybean	nucleus	52.46	55.85
CDX69365	Canola	cytosol	45.82	55.25
CDX76928	Canola	nucleus	50.97	55.14
Bra030242.1-P	Field mustard	nucleus	50.06	55.11
CDY13765	Canola	nucleus	51.09	55.06
Bra038528.1-P	Field mustard	nucleus	51.09	55.06
CDY25593	Canola	nucleus	49.94	54.98
CDY15291	Canola	nucleus	9.51	53.55
AT2G22400.1	Thale cress	cytosol	49.48	53.47
KRH31314	Soybean	cytosol	49.71	53.19
Solyc05g051520.2.1	Tomato	nucleus	49.26	52.25
Solyc11g010110.1.1	Tomato	nucleus	52.12	51.82
PGSC0003DMT400041672	Potato	nucleus	51.89	51.59
AT4G40000.1	Thale cress	nucleus	45.7	50.96
KRH59300	Soybean	mitochondrion	26.23	47.22
KRG97553	Soybean	extracellular, plasma membrane	21.31	45.26
KRH45277	Soybean	cytosol	4.7	37.27
TraesCS6B01G213900.2	Wheat	plastid	8.59	14.82
TraesCS6B01G315600.1	Wheat	plastid	12.83	14.66
TraesCS5B01G251800.1	Wheat	mitochondrion, plastid	8.36	13.25

Protein Annotations

MapMan:16.6.7.8	Gene3D:3.40.50.150	ncoils:Coil	InterPro:Fmu/NOL1/Nop2p_CS	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0016428	GO:GO:0016740	InterPro:IPR001678	InterPro:MeTrfase_RsmB/NOP2	PFAM:PF01189	PRINTS:PR02008
PRINTS:PR02011	ScanProsite:PS01153	PFscan:PS51686	PANTHER:PTHR22808	PANTHER:PTHR22808:SF14	InterPro:RCMT
InterPro:RCMT_NCL1	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	EnsemblPlantsGene:TraesCS5B01G247600	EnsemblPlants:TraesCS5B01G247600.1	SEG:seg

Description

No Description!

Coordinates

chr5B:+:429614455..429621541

Molecular Weight (calculated)

97550.6 Da

IEP (calculated)

5.321

GRAVY (calculated)

-0.521

Length

873 amino acids

Sequence
(BLAST)

001: MGGGRKRGRS QRRHFKQERE NVWKDNPRRP PASAGEGGEG NGWQPFATEN LAFEAYYKGQ QIVPEEEWDA FMSMLRKPLP AAFRINASCQ FYQDICSQLE
101: NDFRKSLESE VSDDHEKEAI RPLAWYPGNL AWHLNFSRMQ LRRNQALESF HEFLKQENEV GNITRQEAVS MVPPLFLNVQ PDHHILDMCA APGSKTFQLL
201: EMIHQSTKPG VLPTAMVVAN DVDVQRCNLL IHQTKRMCTA NLIVTNHEAQ NFPGCSLAKF CPEACAESKL QRLEFDRILC DVPCSGDGTA RKAPDMWRTW
301: NIGMGNGLHR LQVEIAMRGI GLLKVGGRMV YSTCSMNPVE NEAVVGEILR RCGDSVELLD VSNELPELIR RPGLKTWKVR DRASWLGSHN DVLHYRKNAI
401: LPSMFPSGKG TTDSCTAGGS VEVNINAVDA DMNESGDMVE GKEETKIATS DSNNGDNANT EEMKQDESES VKVSRGSDEK TDSASIVTEH SDLPLHRCMR
501: IIPHDQNSGA FFIAVLQKLS PLNESLVVEV MKGERSTSKD KASKCSNGQG SDTVPAEEIS VQQPGVDDTH VLVEQQNRDM DTEISKDKSS EEAKVVAGEV
601: QNDQATRRDK RKTQNQGRWR GVDPVIFFKD EATIRSIVSF YGIKDSFTLE GHLVTRNPDT NHVKRIYYVS KSVKEVLDLN LKVGERLKIT SLGLKIFERQ
701: SSKEGSPCTF RLSSEGLPLL LPYITKQILY ASAIDFQHLL QYRIIKFPDF VDVKFGEQAS ALLQGCCVVI LREGHEDLES IGMDPSAIAV VCWKGKTNLC
801: VMVTPMDGRE LLERISFRFG LKIPKLDDGK PDLKCDDGSD EQPDGGAETV DPDCVPESKA SEDMDISDVK DTE

Best Arabidopsis Sequence Match ( AT2G22400.1 )
(BLAST)

001: MGRGGRHRGR TQRKDFKESR ENVWKRPKSD ASVDGSDNAV PEQKPTWEPI VTVNPNFEEY YKKQGIVKAE EWDLFMEILR KPLPAAFRVN SNGQFCDEII
101: SILENDFMKS LQAEAIEGGE LEAIKPLPWY PKNLAWHSNF SRKEIRKNQT LERFHEFLKL ENEVGNITRQ EAVSMVPPLF LDVHPDHFVL DMCAAPGSKT
201: FQLLEIIHEA SEPGSLPNGL VVANDVDFKR SNLLIHQTKR MCTSNLIVTN HEGQQFPGCR LNKSRASEKG ISENMPINQL AFDRVLCDVP CSGDGTLRKA
301: PDIWRKWNSG MGNGLHSLQI ILAMRGLSLL KVGGKMIYST CSMNPVEDEA VVAEILRRCG DSVELLDVSD KLPELIRRPG LKAWKVRDKG GWFTSYKDVP
401: QNRRGGVLVS MFPSGKYLKD STETTEKNEN GDVNGCEDGL KETDISVVDA TPEEQAEEVS DLPLERCMRI IPHDQNTGAF FIAVLQKKSP LPEFQEKPNT
501: KRNSTAKSTD STEKSPSKES VVTVDAGVPD ESAVEKVIEA DSNIEKNDSL EPEKKITEGE SITEDKEANS SNAGGKRKVP MQGKWKGFDP VVFVKDETVI
601: NGIKEFYGIK DESFPLHGHL VARNTDTSSV KRIYYVSKSV KEVLQLNFAV GQQLKIASVG LKMFERQSAK EGSSTLCPFR ISSEGLPVIL PYITKQVLYT
701: PMADFKLLLQ DKSIKFHDFV NPQLAQKATD LVMGSCVVIL SDGEVPVKAD ASTIAISCWR GKASLAVMAT VADCQELLER FAEKTPKTEG GSVNGSNGDS
801: DGPLAMET

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8L601]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.