CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra038528.1-P	Field mustard	nucleus	99.38	99.38
CDY15291	Canola	nucleus	18.64	97.42
CDX76928	Canola	nucleus	95.68	96.03
CDX89460	Canola	nucleus	87.16	90.28
CDY25593	Canola	nucleus	87.53	89.41
AT2G22400.1	Thale cress	cytosol	85.19	85.4
KRH59299	Soybean	cytosol	27.78	70.75
CDX69365	Canola	cytosol	62.84	70.3
CDY68255	Canola	cytosol, mitochondrion	61.73	70.03
VIT_07s0191g00040.t01	Wine grape	nucleus	61.48	59.5
KRH43150	Soybean	nucleus	59.51	58.78
KRH31314	Soybean	cytosol	58.64	58.21
Solyc11g010110.1.1	Tomato	nucleus	58.89	54.33
PGSC0003DMT400041672	Potato	nucleus	58.89	54.33
Solyc05g051520.2.1	Tomato	nucleus	55.19	54.31
GSMUA_Achr7P19120_001	Banana	nucleus	55.19	53.73
TraesCS5B01G247600.1	Wheat	cytosol, mitochondrion	55.06	51.09
TraesCS5A01G249700.1	Wheat	cytosol	55.06	51.03
TraesCS5D01G256900.1	Wheat	cytosol	54.81	50.86
EER96904	Sorghum	nucleus	53.83	49.89
Os09t0471900-01	Rice	nucleus	53.83	49.55
KRH59300	Soybean	mitochondrion	29.63	49.48
Zm00001d020810_P002	Maize	nucleus	54.07	49.27
KRG97553	Soybean	extracellular, plasma membrane	24.07	47.45
KXG25732	Sorghum	mitochondrion	49.01	46.98
Zm00001d031265_P029	Maize	mitochondrion	46.79	45.94
TraesCS4A01G254100.3	Wheat	mitochondrion	47.16	45.91
TraesCS4B01G060400.1	Wheat	mitochondrion, plastid	46.91	45.62
TraesCS4D01G060100.1	Wheat	plastid	46.54	45.48
KRH45277	Soybean	cytosol	5.31	39.09
CDY28964	Canola	cytosol	4.07	24.63
CDX85924	Canola	cytosol	3.83	23.85
CDX89321	Canola	plastid	12.96	16.43
CDX94307	Canola	plastid	12.84	16.33
CDY19785	Canola	plastid	9.75	16.32
CDY06550	Canola	nucleus	12.72	16.27
CDX87063	Canola	plastid	9.63	16.12
CDY66223	Canola	mitochondrion	5.06	16.08
CDY68035	Canola	nucleus	12.72	15.92
CDY05536	Canola	plastid	9.51	15.75
CDY28628	Canola	nucleus	12.59	15.57
CDY24989	Canola	plastid	9.38	15.54
CDY17367	Canola	mitochondrion, nucleus	12.59	15.25
CDY43364	Canola	plastid	9.26	14.34
CDY24205	Canola	plastid	9.14	14.23
CDY06532	Canola	cytosol	5.68	12.3
CDX91690	Canola	cytosol, plastid	2.35	9.27
CDY17518	Canola	cytosol	2.22	8.78
CDY62126	Canola	cytosol	2.47	8.73
CDY65896	Canola	nucleus	2.22	7.89
HORVU6Hr1G034260.1	Barley	extracellular	0.62	7.25

Protein Annotations

KEGG:00564+2.1.1.17	MapMan:16.6.7.8	GO:A0A078FH61	UniProt:A0A078FH61	EnsemblPlants:CDY13765	ProteinID:CDY13765
ProteinID:CDY13765.1	InterPro:Fmu/NOL1/Nop2p_CS	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824
GO:GO:0005488	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987
GO:GO:0016428	GO:GO:0016740	GO:GO:0030488	GO:GO:0032259	EnsemblPlantsGene:GSBRNA2T00078198001	InterPro:IPR001678
InterPro:MeTrfase_RsmB/NOP2	PFAM:PF01189	PRINTS:PR02008	PRINTS:PR02011	ScanProsite:PS01153	PFscan:PS51686
PANTHER:PTHR22808	PANTHER:PTHR22808:SF14	MetaCyc:PWY-6825	InterPro:RCMT	InterPro:RCMT_NCL1	InterPro:SAM-dependent_MTases
SUPFAM:SSF53335	UniParc:UPI0004EF078A	SEG:seg	:	:	:

Description

BnaA09g42670DBnaA09g42670D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FH61]

Coordinates

chrLK032038:+:233615..237706

Molecular Weight (calculated)

90215.3 Da

IEP (calculated)

5.811

GRAVY (calculated)

-0.473

Length

810 amino acids

Sequence
(BLAST)

001: MGRGRHRGRS QRKHFKESRE NVWKRPRTDP TVDASDNAVA DKPSWEPILT DNPNFEEYYK EQGIVRAEEW DVFMEILRKP LPAAFRVNSN SQFCGDIISI
101: LENDFVKSLQ AEAIEGGELE AIKPLPWYPK NLAWHSNFSR KQIRKHKTLE RFHEFLKLEN EVGNITRQEA VSMVPPLFLD VHPDHFVLDM CAAPGSKTFQ
201: LLEIIHGASE PGTLPNGMVV ANDVDFQRSN LLIHQTKRMC TSNLIVTNHE GQQFPGCRLN KSRASEKGLS EDMPINQLSF DRVLCDVPCS GDGTLRKAPD
301: IWRKWNSGMG NGLHSLQVIL AMRGLSLLKV GGKMIYSTCS MNPVEDEAVV AEILRRCGDS VELVDVSDKL PELIRRPGLK TWKVRDKGGW FTSYKDVPQN
401: RRGGVLVSMF PSGKNLTDST QTTQNNENGG VNASEDGCKE TDKSVVDAIP DEPVVEVSDL PLERCMRIIP HDQNTGAFFI AVLQKVSHLP EFQEKPNPRK
501: HSSTKNADST EKAPTEEAVV TADAEPVESP VEKVIEADAD VEKDDSLVEP EKEKNVEGET IKGEKEANSL SHAGDKRKVP MQGKWKGFDP VVFLKDETLI
601: DSVKEFYGIR DESFPLYGHL VTRNTDTSSV KRIYYVSKSV KEVLQLNFAV GQQLKIASVG LKMFERQTAK EGGSKPCSFR ISSEGLPVIL PYITKQVLYS
701: PMADFKHLLE YKSIKFPDFV NKQLGQKAID LVLGCCVVIL SDGEEPVEVD ASTIAISCWR GKNSLGVMVT SADCQELLER LAERTPKTEV GSVNGSNGDS
801: GGPADAMETA

Best Arabidopsis Sequence Match ( AT2G22400.1 )
(BLAST)

001: MGRGGRHRGR TQRKDFKESR ENVWKRPKSD ASVDGSDNAV PEQKPTWEPI VTVNPNFEEY YKKQGIVKAE EWDLFMEILR KPLPAAFRVN SNGQFCDEII
101: SILENDFMKS LQAEAIEGGE LEAIKPLPWY PKNLAWHSNF SRKEIRKNQT LERFHEFLKL ENEVGNITRQ EAVSMVPPLF LDVHPDHFVL DMCAAPGSKT
201: FQLLEIIHEA SEPGSLPNGL VVANDVDFKR SNLLIHQTKR MCTSNLIVTN HEGQQFPGCR LNKSRASEKG ISENMPINQL AFDRVLCDVP CSGDGTLRKA
301: PDIWRKWNSG MGNGLHSLQI ILAMRGLSLL KVGGKMIYST CSMNPVEDEA VVAEILRRCG DSVELLDVSD KLPELIRRPG LKAWKVRDKG GWFTSYKDVP
401: QNRRGGVLVS MFPSGKYLKD STETTEKNEN GDVNGCEDGL KETDISVVDA TPEEQAEEVS DLPLERCMRI IPHDQNTGAF FIAVLQKKSP LPEFQEKPNT
501: KRNSTAKSTD STEKSPSKES VVTVDAGVPD ESAVEKVIEA DSNIEKNDSL EPEKKITEGE SITEDKEANS SNAGGKRKVP MQGKWKGFDP VVFVKDETVI
601: NGIKEFYGIK DESFPLHGHL VARNTDTSSV KRIYYVSKSV KEVLQLNFAV GQQLKIASVG LKMFERQSAK EGSSTLCPFR ISSEGLPVIL PYITKQVLYT
701: PMADFKLLLQ DKSIKFHDFV NPQLAQKATD LVMGSCVVIL SDGEVPVKAD ASTIAISCWR GKASLAVMAT VADCQELLER FAEKTPKTEG GSVNGSNGDS
801: DGPLAMET

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8L601]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.