Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G256900.1 | Wheat | cytosol | 95.65 | 95.76 |
| TraesCS5B01G247600.1 | Wheat | cytosol, mitochondrion | 95.19 | 95.3 |
| HORVU5Hr1G070390.9 | Barley | cytosol, nucleus, plastid | 89.7 | 88.89 |
| Os09t0471900-01 | Rice | nucleus | 79.75 | 79.2 |
| EER96904 | Sorghum | nucleus | 77.35 | 77.35 |
| Zm00001d020810_P002 | Maize | nucleus | 76.77 | 75.48 |
| KRH59299 | Soybean | cytosol | 24.6 | 67.61 |
| GSMUA_Achr7P19120_001 | Banana | nucleus | 56.29 | 59.13 |
| TraesCS4A01G254100.3 | Wheat | mitochondrion | 55.03 | 57.81 |
| VIT_07s0191g00040.t01 | Wine grape | nucleus | 53.78 | 56.15 |
| CDX89460 | Canola | nucleus | 50.0 | 55.88 |
| KRH43150 | Soybean | nucleus | 52.4 | 55.85 |
| CDY68255 | Canola | cytosol, mitochondrion | 45.54 | 55.74 |
| Bra011816.1-P | Field mustard | cytosol, mitochondrion | 45.54 | 55.74 |
| CDX69365 | Canola | cytosol | 45.77 | 55.25 |
| Bra030242.1-P | Field mustard | nucleus | 50.0 | 55.11 |
| CDY13765 | Canola | nucleus | 51.03 | 55.06 |
| CDY25593 | Canola | nucleus | 49.89 | 54.98 |
| Bra038528.1-P | Field mustard | nucleus | 50.92 | 54.94 |
| CDX76928 | Canola | nucleus | 50.69 | 54.89 |
| CDY15291 | Canola | nucleus | 9.73 | 54.84 |
| AT2G22400.1 | Thale cress | cytosol | 49.43 | 53.47 |
| KRH31314 | Soybean | cytosol | 49.66 | 53.19 |
| Solyc05g051520.2.1 | Tomato | nucleus | 48.86 | 51.88 |
| Solyc11g010110.1.1 | Tomato | nucleus | 51.83 | 51.59 |
| PGSC0003DMT400041672 | Potato | nucleus | 51.6 | 51.37 |
| AT4G40000.1 | Thale cress | nucleus | 45.42 | 50.7 |
| KRH59300 | Soybean | mitochondrion | 25.86 | 46.6 |
| KRG97553 | Soybean | extracellular, plasma membrane | 21.17 | 45.01 |
| KRH45277 | Soybean | cytosol | 4.81 | 38.18 |
| TraesCS6A01G183400.2 | Wheat | plastid | 8.81 | 15.22 |
| TraesCS6A01G286600.1 | Wheat | nucleus | 12.59 | 14.23 |
| TraesCS5A01G253000.1 | Wheat | mitochondrion, plastid | 8.35 | 13.25 |
Protein Annotations
| MapMan:16.6.7.8 | Gene3D:3.40.50.150 | ncoils:Coil | InterPro:Fmu/NOL1/Nop2p_CS | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 |
| GO:GO:0016428 | GO:GO:0016740 | InterPro:IPR001678 | InterPro:MeTrfase_RsmB/NOP2 | PFAM:PF01189 | PRINTS:PR02008 |
| PRINTS:PR02011 | ScanProsite:PS01153 | PFscan:PS51686 | PANTHER:PTHR22808 | PANTHER:PTHR22808:SF14 | InterPro:RCMT |
| InterPro:RCMT_NCL1 | InterPro:SAM-dependent_MTases | SUPFAM:SSF53335 | EnsemblPlantsGene:TraesCS5A01G249700 | EnsemblPlants:TraesCS5A01G249700.1 | SEG:seg |
Description
No Description!
Coordinates
chr5A:+:464471482..464478646
Molecular Weight (calculated)
97588.6 Da
IEP (calculated)
5.316
GRAVY (calculated)
-0.521
Length
874 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGGRKRGRS QRRHFKQERE NVWKDNPRRP PASAGEGGEG NGWQPFATEN LAFEAYYKGQ QIVPEEEWDA FMSMLRKPLP AAFRINASSQ FCQDICSQLE
101: NDFRKSLETE VNDDHEKEAI RPLAWYPGNL AWHLNFSRMQ LRRNQALESF HEFLKQENEV GNITRQEAVS MVPPLFLNVQ PDHHILDMCA APGSKTFQLL
201: EMIHQSTKPG VLPTAMVVAN DVDVQRCNLL IHQTKRMCTA NLIVTNHEAQ NFPGCSLAKF CPEAYIDESK PQRLEFDRIL CDVPCSGDGT VRKAPDMWRT
301: WNIGMGNGLH RLQVEIAMRG IALLKVGGRM VYSTCSMNPV ENEAVVGEIL RRCGDSVELL DVSNELPELI RRPGLSTWKV RDRASWLGSH KDVLHYRKNA
401: ILPSMFPSGK ATTDSCTAGG SVEVNIDAVD ADMSESGGMV EGKQETKIAT DDSNNGDNGK TEEIEQDESE SVKVSRGSNE KTDSTSIVTE HSNLPLHRCM
501: RIIPHDQNSG AFFIAVLQKL SPLNESPVVE VMKGEHSTSK DKALKCSNGQ GSDKVPAEEI SVQQPGVDDS HVLVEQQNRD MDAEISKDRS SEEAKVIAGE
601: VQNDQATRRD KRKTQNQGRW RGVDPVIFFK DEATIRSIVS FYGIKDSFTL EGHLVTRNPD TNHVKRIYYV SKSVTEVLDL NVKVGERLKI TSLGLKIFER
701: QSSKEGSPCT FRLSSEGLPL LLPYITKQIL YASAIDFQHL LQYRIIKFPD FVDAKFGEQA SALLQGCCVV ILREGHEDLE SIGMDPSAIA VVCWKGKTNL
801: CVMVTPMDGR ELLDRISFRF GLKIPKVDDG KPDLKSDDGS DEQPDGGAET VDPDCMPESK AAEDMDISDV KDAE
101: NDFRKSLETE VNDDHEKEAI RPLAWYPGNL AWHLNFSRMQ LRRNQALESF HEFLKQENEV GNITRQEAVS MVPPLFLNVQ PDHHILDMCA APGSKTFQLL
201: EMIHQSTKPG VLPTAMVVAN DVDVQRCNLL IHQTKRMCTA NLIVTNHEAQ NFPGCSLAKF CPEAYIDESK PQRLEFDRIL CDVPCSGDGT VRKAPDMWRT
301: WNIGMGNGLH RLQVEIAMRG IALLKVGGRM VYSTCSMNPV ENEAVVGEIL RRCGDSVELL DVSNELPELI RRPGLSTWKV RDRASWLGSH KDVLHYRKNA
401: ILPSMFPSGK ATTDSCTAGG SVEVNIDAVD ADMSESGGMV EGKQETKIAT DDSNNGDNGK TEEIEQDESE SVKVSRGSNE KTDSTSIVTE HSNLPLHRCM
501: RIIPHDQNSG AFFIAVLQKL SPLNESPVVE VMKGEHSTSK DKALKCSNGQ GSDKVPAEEI SVQQPGVDDS HVLVEQQNRD MDAEISKDRS SEEAKVIAGE
601: VQNDQATRRD KRKTQNQGRW RGVDPVIFFK DEATIRSIVS FYGIKDSFTL EGHLVTRNPD TNHVKRIYYV SKSVTEVLDL NVKVGERLKI TSLGLKIFER
701: QSSKEGSPCT FRLSSEGLPL LLPYITKQIL YASAIDFQHL LQYRIIKFPD FVDAKFGEQA SALLQGCCVV ILREGHEDLE SIGMDPSAIA VVCWKGKTNL
801: CVMVTPMDGR ELLDRISFRF GLKIPKVDDG KPDLKSDDGS DEQPDGGAET VDPDCMPESK AAEDMDISDV KDAE
001: MGRGGRHRGR TQRKDFKESR ENVWKRPKSD ASVDGSDNAV PEQKPTWEPI VTVNPNFEEY YKKQGIVKAE EWDLFMEILR KPLPAAFRVN SNGQFCDEII
101: SILENDFMKS LQAEAIEGGE LEAIKPLPWY PKNLAWHSNF SRKEIRKNQT LERFHEFLKL ENEVGNITRQ EAVSMVPPLF LDVHPDHFVL DMCAAPGSKT
201: FQLLEIIHEA SEPGSLPNGL VVANDVDFKR SNLLIHQTKR MCTSNLIVTN HEGQQFPGCR LNKSRASEKG ISENMPINQL AFDRVLCDVP CSGDGTLRKA
301: PDIWRKWNSG MGNGLHSLQI ILAMRGLSLL KVGGKMIYST CSMNPVEDEA VVAEILRRCG DSVELLDVSD KLPELIRRPG LKAWKVRDKG GWFTSYKDVP
401: QNRRGGVLVS MFPSGKYLKD STETTEKNEN GDVNGCEDGL KETDISVVDA TPEEQAEEVS DLPLERCMRI IPHDQNTGAF FIAVLQKKSP LPEFQEKPNT
501: KRNSTAKSTD STEKSPSKES VVTVDAGVPD ESAVEKVIEA DSNIEKNDSL EPEKKITEGE SITEDKEANS SNAGGKRKVP MQGKWKGFDP VVFVKDETVI
601: NGIKEFYGIK DESFPLHGHL VARNTDTSSV KRIYYVSKSV KEVLQLNFAV GQQLKIASVG LKMFERQSAK EGSSTLCPFR ISSEGLPVIL PYITKQVLYT
701: PMADFKLLLQ DKSIKFHDFV NPQLAQKATD LVMGSCVVIL SDGEVPVKAD ASTIAISCWR GKASLAVMAT VADCQELLER FAEKTPKTEG GSVNGSNGDS
801: DGPLAMET
101: SILENDFMKS LQAEAIEGGE LEAIKPLPWY PKNLAWHSNF SRKEIRKNQT LERFHEFLKL ENEVGNITRQ EAVSMVPPLF LDVHPDHFVL DMCAAPGSKT
201: FQLLEIIHEA SEPGSLPNGL VVANDVDFKR SNLLIHQTKR MCTSNLIVTN HEGQQFPGCR LNKSRASEKG ISENMPINQL AFDRVLCDVP CSGDGTLRKA
301: PDIWRKWNSG MGNGLHSLQI ILAMRGLSLL KVGGKMIYST CSMNPVEDEA VVAEILRRCG DSVELLDVSD KLPELIRRPG LKAWKVRDKG GWFTSYKDVP
401: QNRRGGVLVS MFPSGKYLKD STETTEKNEN GDVNGCEDGL KETDISVVDA TPEEQAEEVS DLPLERCMRI IPHDQNTGAF FIAVLQKKSP LPEFQEKPNT
501: KRNSTAKSTD STEKSPSKES VVTVDAGVPD ESAVEKVIEA DSNIEKNDSL EPEKKITEGE SITEDKEANS SNAGGKRKVP MQGKWKGFDP VVFVKDETVI
601: NGIKEFYGIK DESFPLHGHL VARNTDTSSV KRIYYVSKSV KEVLQLNFAV GQQLKIASVG LKMFERQSAK EGSSTLCPFR ISSEGLPVIL PYITKQVLYT
701: PMADFKLLLQ DKSIKFHDFV NPQLAQKATD LVMGSCVVIL SDGEVPVKAD ASTIAISCWR GKASLAVMAT VADCQELLER FAEKTPKTEG GSVNGSNGDS
801: DGPLAMET
Arabidopsis Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8L601]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.