Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH59299 | Soybean | cytosol | 56.77 | 27.67 |
| CDX76928 | Canola | nucleus | 98.71 | 18.96 |
| Bra038528.1-P | Field mustard | nucleus | 98.06 | 18.77 |
| CDY13765 | Canola | nucleus | 97.42 | 18.64 |
| CDX89460 | Canola | nucleus | 84.52 | 16.75 |
| CDY25593 | Canola | nucleus | 85.16 | 16.65 |
| AT2G22400.1 | Thale cress | cytosol | 84.52 | 16.21 |
| CDY68255 | Canola | cytosol, mitochondrion | 65.81 | 14.29 |
| CDX69365 | Canola | cytosol | 66.45 | 14.23 |
| VIT_07s0191g00040.t01 | Wine grape | nucleus | 64.52 | 11.95 |
| KRH31314 | Soybean | cytosol | 60.0 | 11.4 |
| GSMUA_Achr7P19120_001 | Banana | nucleus | 59.35 | 11.06 |
| KRH43150 | Soybean | nucleus | 56.13 | 10.61 |
| PGSC0003DMT400041672 | Potato | nucleus | 58.71 | 10.36 |
| Solyc05g051520.2.1 | Tomato | nucleus | 54.84 | 10.33 |
| Solyc11g010110.1.1 | Tomato | nucleus | 57.42 | 10.14 |
| EER96904 | Sorghum | nucleus | 55.48 | 9.84 |
| Zm00001d020810_P002 | Maize | nucleus | 56.13 | 9.79 |
| TraesCS5A01G249700.1 | Wheat | cytosol | 54.84 | 9.73 |
| TraesCS5B01G247600.1 | Wheat | cytosol, mitochondrion | 53.55 | 9.51 |
| TraesCS5D01G256900.1 | Wheat | cytosol | 53.55 | 9.51 |
| Os09t0471900-01 | Rice | nucleus | 53.55 | 9.43 |
| TraesCS4B01G060400.1 | Wheat | mitochondrion, plastid | 49.03 | 9.12 |
| KXG25732 | Sorghum | mitochondrion | 49.68 | 9.11 |
| TraesCS4A01G254100.3 | Wheat | mitochondrion | 47.74 | 8.89 |
| Zm00001d031265_P029 | Maize | mitochondrion | 47.1 | 8.85 |
| TraesCS4D01G060100.1 | Wheat | plastid | 45.81 | 8.56 |
| CDX91690 | Canola | cytosol, plastid | 7.74 | 5.85 |
| CDY62126 | Canola | cytosol | 8.39 | 5.68 |
| CDY17518 | Canola | cytosol | 7.1 | 5.37 |
| CDY65896 | Canola | nucleus | 7.74 | 5.26 |
| HORVU6Hr1G034260.1 | Barley | extracellular | 1.94 | 4.35 |
| CDY19785 | Canola | plastid | 11.61 | 3.72 |
| CDY24205 | Canola | plastid | 12.26 | 3.65 |
| CDY43364 | Canola | plastid | 12.26 | 3.63 |
| CDX87063 | Canola | plastid | 10.97 | 3.51 |
| CDY28628 | Canola | nucleus | 13.55 | 3.21 |
| CDX94307 | Canola | plastid | 12.9 | 3.14 |
| CDY17367 | Canola | mitochondrion, nucleus | 13.55 | 3.14 |
| CDX89321 | Canola | plastid | 12.9 | 3.13 |
| CDY05536 | Canola | plastid | 9.68 | 3.07 |
| CDY24989 | Canola | plastid | 9.68 | 3.07 |
| CDY06550 | Canola | nucleus | 12.26 | 3.0 |
| CDY06532 | Canola | cytosol | 7.1 | 2.94 |
| CDY68035 | Canola | nucleus | 12.26 | 2.94 |
| CDY66223 | Canola | mitochondrion | 1.29 | 0.78 |
| KRH59300 | Soybean | mitochondrion | 0.0 | 0.0 |
| KRH45277 | Soybean | cytosol | 0.0 | 0.0 |
| CDY28964 | Canola | cytosol | 0.0 | 0.0 |
| KRG97553 | Soybean | extracellular, plasma membrane | 0.0 | 0.0 |
| CDX85924 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY15291 | EnsemblPlantsGene:GSBRNA2T00085524001 | Gene3D:3.40.50.150 | PANTHER:PTHR22808 | PANTHER:PTHR22808:SF14 | ProteinID:CDY15291 |
| ProteinID:CDY15291.1 | SEG:seg | UniParc:UPI0004EF3AF2 | UniProt:A0A078FQ59 | MapMan:35.2 | : |
Description
BnaC06g07770DBnaC06g07770D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FQ59]
Coordinates
chrLK032053:-:270128..270942
Molecular Weight (calculated)
18323.6 Da
IEP (calculated)
9.027
GRAVY (calculated)
-0.963
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRGRHRGRS QRKHFKESRE NVWKRPRTDP TVDASDNAVA DKPSWEPILT DNPNFEEYYK EQGLVRAEEW DVFMEILRKP LPAAFRVNSN SQFCDDIISI
101: LENDFVKSLQ AEAIEGGELE AIKPLPWYPK NLAWHSNFSR KQIRKHKTLE RYPFH
101: LENDFVKSLQ AEAIEGGELE AIKPLPWYPK NLAWHSNFSR KQIRKHKTLE RYPFH
001: MFENPLKSDA SFDSNLQKPI CSNLHFEDED SRSITSVSLM IDIRSILKAI ESGELEAIKP LPWYPKNLSF HGRRLEKTRY LRDFQLSRDK ARFTIRLKSW
101: SASCPKPHCC KVL
101: SASCPKPHCC KVL
Arabidopsis Description
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.