CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011816.1-P	Field mustard	cytosol, mitochondrion	100.0	100.0
CDX69365	Canola	cytosol	95.1	93.78
AT4G40000.1	Thale cress	nucleus	81.37	74.2
CDY15291	Canola	nucleus	14.29	65.81
KRH59299	Soybean	cytosol	28.99	65.09
CDX89460	Canola	nucleus	69.75	63.68
CDY25593	Canola	nucleus	69.89	62.93
CDY13765	Canola	nucleus	70.03	61.73
CDX76928	Canola	nucleus	69.61	61.59
VIT_07s0191g00040.t01	Wine grape	nucleus	63.31	54.0
KRH43150	Soybean	nucleus	60.78	52.93
KRH31314	Soybean	cytosol	60.22	52.7
Solyc05g051520.2.1	Tomato	nucleus	58.54	50.79
GSMUA_Achr7P19120_001	Banana	nucleus	56.44	48.44
Solyc11g010110.1.1	Tomato	nucleus	59.52	48.41
PGSC0003DMT400041672	Potato	nucleus	59.52	48.41
TraesCS5B01G247600.1	Wheat	cytosol, mitochondrion	56.02	45.82
TraesCS5D01G256900.1	Wheat	cytosol	55.74	45.59
TraesCS5A01G249700.1	Wheat	cytosol	55.74	45.54
EER96904	Sorghum	nucleus	55.46	45.31
Zm00001d020810_P002	Maize	nucleus	55.88	44.88
Os09t0471900-01	Rice	nucleus	54.76	44.43
Zm00001d031265_P029	Maize	mitochondrion	50.14	43.39
KXG25732	Sorghum	mitochondrion	51.26	43.31
TraesCS4D01G060100.1	Wheat	plastid	50.14	43.18
TraesCS4A01G254100.3	Wheat	mitochondrion	50.28	43.15
KRH59300	Soybean	mitochondrion	29.27	43.09
TraesCS4B01G060400.1	Wheat	mitochondrion, plastid	49.86	42.74
KRG97553	Soybean	extracellular, plasma membrane	23.95	41.61
KRH45277	Soybean	cytosol	5.18	33.64
CDY28964	Canola	cytosol	4.62	24.63
CDX85924	Canola	cytosol	4.34	23.85
CDX87063	Canola	plastid	11.76	17.36
CDY19785	Canola	plastid	11.48	16.94
CDY24989	Canola	plastid	11.48	16.77
CDY05536	Canola	plastid	11.48	16.77
CDY66223	Canola	mitochondrion	5.74	16.08
CDY06550	Canola	nucleus	13.59	15.32
CDY68035	Canola	nucleus	13.59	14.99
CDX94307	Canola	plastid	13.31	14.91
CDY28628	Canola	nucleus	13.59	14.81
CDX89321	Canola	plastid	13.17	14.71
CDY17367	Canola	mitochondrion, nucleus	13.73	14.65
CDY43364	Canola	plastid	10.64	14.53
CDY24205	Canola	plastid	10.5	14.42
CDY06532	Canola	cytosol	6.72	12.83
CDX91690	Canola	cytosol, plastid	2.66	9.27
CDY17518	Canola	cytosol	2.52	8.78
CDY62126	Canola	cytosol	2.8	8.73
CDY65896	Canola	nucleus	2.52	7.89
HORVU6Hr1G034260.1	Barley	extracellular	0.7	7.25

Protein Annotations

KEGG:00564+2.1.1.17	MapMan:16.6.7.8	GO:A0A078JP96	UniProt:A0A078JP96	EnsemblPlants:CDY68255	ProteinID:CDY68255
ProteinID:CDY68255.1	InterPro:Fmu/NOL1/Nop2p_CS	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824
GO:GO:0005488	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987
GO:GO:0016428	GO:GO:0016740	GO:GO:0030488	GO:GO:0032259	EnsemblPlantsGene:GSBRNA2T00072104001	InterPro:IPR001678
InterPro:MeTrfase_RsmB/NOP2	PFAM:PF01189	PRINTS:PR02008	PRINTS:PR02011	ScanProsite:PS01153	PFscan:PS51686
PANTHER:PTHR22808	PANTHER:PTHR22808:SF14	MetaCyc:PWY-6825	InterPro:RCMT	InterPro:RCMT_NCL1	InterPro:SAM-dependent_MTases
SUPFAM:SSF53335	UniParc:UPI000254623A	SEG:seg	:	:	:

Description

BnaA01g34570DBnaA01g34570D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JP96]

Coordinates

chrLK037057:+:1800..5155

Molecular Weight (calculated)

79971.4 Da

IEP (calculated)

7.469

GRAVY (calculated)

-0.421

Length

714 amino acids

Sequence
(BLAST)

001: MGRGRRHRGR SHRNQSEDSR ETAPKPLKPD APFDSTIQNR TWSNLDFEEY YKEQRIVRAE EWDSFIEILR KPLPAAFRVN SNGQFCDEIL SMLENDFVKS
101: LQAEAVESGE VEAIKPLPWY PKSLAWHSNF SRKEIRKNQT LERFHEFLKL ETEVGNMTRQ EAVSMVPPLF LDVHPDHFVL DMCAAPGSKT FQLLEIIHES
201: AEPGSLPNGM VVANDVDYKR SNLLIHQTKR TCTTNLIVTN NEGQHFPNCN SKRALSIDQL LFDRVLCDVP CSGDGTLRKA PDIWRRWNSG SGNGLHSLQV
301: VIAMRGLSLL KVGGRMVYST CSMNPIEDEA VVAEILRRCG SSVELVDVSD KLPELIRRPG LKKWKVHDRG GWYRSYKDVP KVQRDGVLRS MFPSGKSDKD
401: STAGGGSSSG EIASDESAEE VEVCDLPLER CVRIVPHDQN TGGFFIAVLH KVSSLPDFQE KRRYTRGRNS SENKEEIVVQ EEAASDNGLK LEKESTSKEV
501: PLPVKGKWKG LDPVVFLRDE TVINGIKSFY GINDESFPLN GHLVTRNSDT STKGNVKRIY YVSRSVKDVL ELNLATGEKI KVASVGLKMF EKQSARECEA
601: GSCSFRITSE GLPVILPYMT KQLLYATMVD FKSLLQYKSI KFTDFVHPQF GQKAAEVAEG YCVVVLVDGT QKDGSEAVKV SSSTVAIGCW KGKASLTVMV
701: TTVDCDQLIQ KLAC

Best Arabidopsis Sequence Match ( AT4G40000.1 )
(BLAST)

001: MGRGRRHRGS TSKRNQIENS NDDNVRKPLK SEASFDSNNL QKPICSNLHF EEYYKEQRIV KAQEWDSFME FLRKPLPAAF RVYSNGQFCD EIRLKLENDF
101: MISLQAEAIE SGELEAIKPL PWYPKNLAWH SNFSRKEIRK NQTLERFHEF LKLETEAGNM TRQESVSMVP PLFLDVHPDH FVLDMCAAPG SKTFQLLEII
201: HESSEPGSLP NGMVVANDVD YKRSNLLIHQ TKRTCTTNLM VTNNEGQHFP SCNTKRTLSV ASETNPHPID QLLFDRVLCD VPCSGDGTLR KAPDIWRRWN
301: SGSGNGLHSL QVVLAMRGLS LLKVGGRMVY STCSMNPIED EAVVAEILRR CGCSVELVDV SDKLPELIRR PGLTKWKVHD RGGWYRSYKD VPKSQRDGVL
401: RSMFPSGKSD KDSSGGKNSY EEMASISSDE SAEEVCDLPL ELCMRILPHD QNTGGFFIAV LHKVSPLPDF QEKVTQKRNL STRNNINSSE KSSSYEAVSD
501: TVVTKPEEGT EEIVLEATVS ENGFEPPEME STWNEGIVEL AQKLDDIEGK REVPSMQGKW KGLYPVVFLR DQTGINGIKT FYGIKDESFP LYGHLVTRNS
601: DISSHGNVKR IYYVSKAVKN VLELNFAVGK PLKISSVGLK MFEKQSAKEC EANCCSFRIT SEGLPVILPY MTKQILYATM ADFKNLLQHK SIKFLDFIHP
701: QIGEKAAELA LGSCVMVLVD DSQLGSEQFK VNSSTIAIGC WKGKASLTVM VTTVDCHQLI QRLSDRSKEK EKAENCFKTA ETA

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JJ52]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.