CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
nucleus 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH59299	Soybean	cytosol	31.25	80.19
KRH43150	Soybean	nucleus	71.08	70.73
KRG97553	Soybean	extracellular, plasma membrane	35.05	69.59
KRH59300	Soybean	mitochondrion	37.87	63.71
Bra011816.1-P	Field mustard	cytosol, mitochondrion	52.7	60.22
CDY68255	Canola	cytosol, mitochondrion	52.7	60.22
CDY15291	Canola	nucleus	11.4	60.0
CDX89460	Canola	nucleus	57.11	59.59
CDX69365	Canola	cytosol	52.7	59.39
CDY13765	Canola	nucleus	58.21	58.64
CDX76928	Canola	nucleus	57.84	58.49
CDY25593	Canola	nucleus	56.74	58.39
Bra038528.1-P	Field mustard	nucleus	57.84	58.27
Bra030242.1-P	Field mustard	nucleus	56.5	58.13
AT2G22400.1	Thale cress	cytosol	56.99	57.55
AT4G40000.1	Thale cress	nucleus	53.19	55.43
GSMUA_Achr7P19120_001	Banana	nucleus	55.88	54.81
EER96904	Sorghum	nucleus	54.53	50.92
Zm00001d020810_P002	Maize	nucleus	54.9	50.39
Os09t0471900-01	Rice	nucleus	54.04	50.11
TraesCS5B01G247600.1	Wheat	cytosol, mitochondrion	53.19	49.71
TraesCS5A01G249700.1	Wheat	cytosol	53.19	49.66
TraesCS5D01G256900.1	Wheat	cytosol	52.94	49.48
TraesCS4D01G060100.1	Wheat	plastid	47.67	46.92
Zm00001d031265_P029	Maize	mitochondrion	47.43	46.91
TraesCS4A01G254100.3	Wheat	mitochondrion	47.67	46.75
TraesCS4B01G060400.1	Wheat	mitochondrion, plastid	47.55	46.58
KXG25732	Sorghum	mitochondrion	48.16	46.51
KRH45277	Soybean	cytosol	6.0	44.55
KRH14216	Soybean	cytosol	6.99	19.66
KRG98455	Soybean	nucleus	13.73	18.06
KRH46413	Soybean	nucleus	13.24	17.59
KRH61558	Soybean	nucleus	10.54	17.41
KRH52232	Soybean	nucleus	10.42	17.31
KRH73916	Soybean	plastid	9.19	14.04
KRH75188	Soybean	cytosol	4.29	11.18

Protein Annotations

EntrezGene:100808598	MapMan:16.6.7.8	Gene3D:3.40.50.150	EMBL:ACUP02007137	InterPro:Fmu/NOL1/Nop2p_CS	EnsemblPlantsGene:GLYMA_11G241400
GO:GO:0001510	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0005488
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987	GO:GO:0016428
GO:GO:0016740	GO:GO:0030488	GO:GO:0032259	UniProt:I1LNJ4	InterPro:IPR001678	EnsemblPlants:KRH31314
ProteinID:KRH31314	ProteinID:KRH31314.1	InterPro:MeTrfase_RsmB/NOP2	PFAM:PF01189	PRINTS:PR02008	PRINTS:PR02011
ScanProsite:PS01153	PFscan:PS51686	PANTHER:PTHR22808	PANTHER:PTHR22808:SF14	MetaCyc:PWY-6825	InterPro:RCMT
InterPro:RCMT_NCL1	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI000294C9AB	SEG:seg	:

Description

hypothetical protein

Coordinates

chr11:-:33556332..33563163

Molecular Weight (calculated)

91584.0 Da

IEP (calculated)

6.001

GRAVY (calculated)

-0.411

Length

816 amino acids

Sequence
(BLAST)

001: MGRGKRGKSR TQRKHFQQNR ENVWTSSKRS KSDPSSENPI PICNPYATQN LAFDHYYKEQ GIVSSEEWDA FVQVLRTPLP AAFRINSTSR FSADIRSQLE
101: NDFVHSLQAE VAEGEDTEAI IPLPWYPENL AWHSNFSRKQ LRKNQTLGRF HEFLKLENEI GNITRQEVVS MAPPLFLDVH SNHFVLDMCA APGSKTFQLL
201: EILHKLTKAG SLPDGMVIAN DLDIQRCNLL IHQTKRMCTA NLIVTNHEAQ HFPGCLLNRN YDKMEPDQQD QLLFDRVLCD VPCSGDGTLR KAPDLWRKWN
301: TGTGNGLHNL QVLIAMRGVS LLKVGGKMIY STCSMNPIEN EAVVAEVLRR GGGSIELVDV SSELPQLIRR PGLKRWKVCD KGKWFFCCKD VPKLRRNVVF
401: PSMFPNGGNY KDDSDCNISI GDDIIIDDVY GNSEDDVQAV ENPVMHEFTE EVSDFPLERC MRLVPHDQNT GAFFIAVLQK VSPLPVAATQ VKPRKEVDKH
501: DDTANQGNED AQELQVNPLE STPEEISEAN INDNRPKTDL KVSSVTCEEV NLKEAQDPCN VENMTKNTPG KRKLQIQGKW RGIDPVVFFK DEVVINSIKV
601: FYGIDEQFPF NGHLVTRNSD TSHVKRIYYI SKSVKDALEL NFSVGQQLKI TSVGLKIFER QTSCEGRSAP CAFRITSEGL PLILPHISKQ ILSASAIDFK
701: HLLQYRTVKF ADFVDAEFGE KAANLMPGCC VVVLGEGSRA ATGPLQVDDS TIAIGCWKGR ASLTIMVGAL ECQELLERLL MCLDTVTEKD SSMHDNKVDE
801: AHESNGKNED VEITGC

Best Arabidopsis Sequence Match ( AT2G22400.1 )
(BLAST)

001: MGRGGRHRGR TQRKDFKESR ENVWKRPKSD ASVDGSDNAV PEQKPTWEPI VTVNPNFEEY YKKQGIVKAE EWDLFMEILR KPLPAAFRVN SNGQFCDEII
101: SILENDFMKS LQAEAIEGGE LEAIKPLPWY PKNLAWHSNF SRKEIRKNQT LERFHEFLKL ENEVGNITRQ EAVSMVPPLF LDVHPDHFVL DMCAAPGSKT
201: FQLLEIIHEA SEPGSLPNGL VVANDVDFKR SNLLIHQTKR MCTSNLIVTN HEGQQFPGCR LNKSRASEKG ISENMPINQL AFDRVLCDVP CSGDGTLRKA
301: PDIWRKWNSG MGNGLHSLQI ILAMRGLSLL KVGGKMIYST CSMNPVEDEA VVAEILRRCG DSVELLDVSD KLPELIRRPG LKAWKVRDKG GWFTSYKDVP
401: QNRRGGVLVS MFPSGKYLKD STETTEKNEN GDVNGCEDGL KETDISVVDA TPEEQAEEVS DLPLERCMRI IPHDQNTGAF FIAVLQKKSP LPEFQEKPNT
501: KRNSTAKSTD STEKSPSKES VVTVDAGVPD ESAVEKVIEA DSNIEKNDSL EPEKKITEGE SITEDKEANS SNAGGKRKVP MQGKWKGFDP VVFVKDETVI
601: NGIKEFYGIK DESFPLHGHL VARNTDTSSV KRIYYVSKSV KEVLQLNFAV GQQLKIASVG LKMFERQSAK EGSSTLCPFR ISSEGLPVIL PYITKQVLYT
701: PMADFKLLLQ DKSIKFHDFV NPQLAQKATD LVMGSCVVIL SDGEVPVKAD ASTIAISCWR GKASLAVMAT VADCQELLER FAEKTPKTEG GSVNGSNGDS
801: DGPLAMET

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8L601]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.