Factsheet for TraesCS6B01G315600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 3
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G267300.1	Wheat	plastid	97.91	97.52
TraesCS6A01G286600.1	Wheat	nucleus	97.12	95.99
HORVU6Hr1G072030.1	Barley	plastid	92.15	93.12
Os09t0551300-02	Rice	nucleus	69.9	76.39
Os02t0724600-01	Rice	nucleus	68.85	75.9
Zm00001d051652_P003	Maize	plasma membrane	68.59	72.98
KXG30856	Sorghum	nucleus, plastid	65.71	72.54
Zm00001d017887_P004	Maize	plastid	68.19	70.98
GSMUA_Achr7P20140_001	Banana	nucleus	50.13	63.94
KRG98455	Soybean	nucleus	46.86	57.74
VIT_19s0015g00840.t01	Wine grape	nucleus	19.37	57.59
KRH46413	Soybean	nucleus	46.07	57.33
VIT_19s0015g00830.t01	Wine grape	nucleus	26.31	55.83
PGSC0003DMT400057532	Potato	nucleus	46.07	55.26
CDX94307	Canola	plastid	45.16	54.16
CDX89321	Canola	plastid	44.63	53.36
Bra026418.1-P	Field mustard	plastid	44.76	53.35
CDY06550	Canola	nucleus	42.93	51.82
Bra035594.1-P	Field mustard	nucleus	43.32	51.72
CDY68035	Canola	nucleus	43.19	51.0
KRH75188	Soybean	cytosol	20.68	50.48
Solyc07g052110.2.1	Tomato	nucleus	46.6	50.42
AT5G55920.1	Thale cress	nucleus	44.63	50.0
CDY28628	Canola	nucleus	42.54	49.62
Bra002867.1-P	Field mustard	mitochondrion, nucleus	42.15	48.86
CDX91690	Canola	cytosol, plastid	13.09	48.78
CDY17367	Canola	mitochondrion, nucleus	42.28	48.28
AT4G26600.5	Thale cress	plastid	43.85	47.72
CDY62126	Canola	cytosol	14.01	46.72
CDY65896	Canola	nucleus	13.87	46.49
CDY17518	Canola	cytosol	12.17	45.37
CDY06532	Canola	cytosol	21.2	43.32
TraesCS5B01G251800.1	Wheat	mitochondrion, plastid	13.61	18.87
TraesCS6B01G213900.2	Wheat	plastid	11.52	17.39
TraesCS5B01G247600.1	Wheat	cytosol, mitochondrion	14.66	12.83
TraesCS4B01G060400.1	Wheat	mitochondrion, plastid	13.74	12.61

Protein Annotations

MapMan:17.1.2.2.3.6	Gene3D:3.30.70.3130	Gene3D:3.40.50.150	ncoils:Coil	InterPro:Fmu/NOL1/Nop2p_CS	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0005488	GO:GO:0006139	GO:GO:0006364
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008757	GO:GO:0009987	GO:GO:0016740
InterPro:IPR001678	InterPro:MeTrfase_RsmB/NOP2	InterPro:Methyltr_RsmF_N	InterPro:Nop2p	PFAM:PF01189	PFAM:PF17125
PRINTS:PR02008	PRINTS:PR02012	ScanProsite:PS01153	PFscan:PS51686	PANTHER:PTHR22807	PANTHER:PTHR22807:SF30
InterPro:RCMT	InterPro:RCMT_NOP2	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	TIGRFAMs:TIGR00446	EnsemblPlantsGene:TraesCS6B01G315600
EnsemblPlants:TraesCS6B01G315600.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr6B:+:563480382..563485683

Molecular Weight (calculated)

84597.8 Da

IEP (calculated)

5.621

GRAVY (calculated)

-0.954

Length

764 amino acids

Sequence
(BLAST)

001: MARKVAQRRP AAPPAPPAAK KVVKVPSRTA KRAAPKKQKL PEPSSDDDSE AEQQPLHEEE EEDSDVEAPS DSDAEELSGS DAGSSEEEED EEEEEDDDPL
101: AGDFLAGSDD GSDEGGDSGE ESDGSDDLVA KSEALDRQKE QAEEDAAADL ALNIRSESDE FRLPTKEELE EEALGPPNLP NLKRRISEIV RVLSNFSKLR
201: QENVARKDYV DQFKTDVMAY YGYNEFLIEA FVEMFPAVEV VELLESFEKR PPECLRTNTL KTRRRDLAAA LIPRGFNLDP IGKWSKVGLV VYDSTVSSGA
301: TVEYMAGHYM KQGASSFLPV MALAPQEKER IVDMAAAPGG KTTYIGALMK NTGIIYANEL NEKRLHGLLG NIHRLGVTNT IVCNYDGKEL PKVLGMNSVD
401: RVLLDAPCTG TGTVWKDAQI KTSKDIDDIR NCAFVQKQLL LAAIDLVDAN SKTGGYIVYS TCSMMIPENE AVIDYALKKR DVKVVPCGLD FGRPGFIRFR
501: EHRFHTSLDK TRRFYPHVNN MDGFFVAKLK KLSNTIPASS ESSKEPEEAV EGVVDPNHDE EDEKDVPDGQ STKSKNHKQG KKKNEQASIP EGGEGDQSQA
601: PERPAKHLKS NKGVKKSSGP KSAEMNGDKK ETRDEQTEHV KSQKGSKKSK GPKNAEMDVD EKETPSEQTE DVKSHKGAKR SNGPKRAGIN GEKKDVAEEQ
701: TEQTSHKKKD VSDKIKKSGS KSTSGTKEKK PVSKEGSKKR KRKWQFKLRR DWEAKQKSEK RTKV

Best Arabidopsis Sequence Match ( AT4G26600.1 )
(BLAST)

001: MAALTRNKKK GSNSQTPPLN KQTKASPLKK AAKTQKPPLK KQRKCISEKK PLKKPEVSTD EEEEEEENEQ SDEGSESGSD LFSDGDEEGN NDSDDDDDDD
101: DDDDDDDEDA EPLAEDFLDG SDNEEVTMGS DLDSDSGGSK LERKSRAIDR KRKKEVQDAD DEFKMNIKEK PDEFQLPTQK ELEEEARRPP DLPSLQMRIR
201: EIVRILSNFK DLKPKGDKHE RNDYVGQLKA DLSSYYGYNE FLIGTLIEMF PVVELMELIE AFEKKRPTSI RTNTLKTRRR DLADILLNRG VNLDPLSKWS
301: KVGLIVYDSQ VPIGATPEYL AGFYMLQSAS SFLPVMALAP REKERVVDMA AAPGGKTTYV AALMKNTGII YANEMKVPRL KSLSANLHRM GVTNTIVCNY
401: DGRELTKVLG QSSVDRVLLD APCSGTGVIS KDESVKTSKS ADDIKKFAHL QKQLILGAID LVDANSKTGG YIVYSTCSVM IPENEAVIDY ALKNRDVKLV
501: PCGLDFGRPG FSSFREHRFH PSLEKTRRFY PHVHNMDGFF VAKLKKMSNA MQPSGNDEPA VTMEQAQVSS SDDDDEKAEA IEELEKPPVA SGQPKRESNT
601: KEDTNKRKNP RSKEIHKGKR NKNTKTESGN VEEPRKQKKK RSQWKNEIAQ AREEKRKTMR ENAKETPKHR G

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:TAIR;Acc:AT4G26600]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.