Factsheet for HORVU6Hr1G072030.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 5
plastid 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G267300.1	Wheat	plastid	94.18	92.83
TraesCS6B01G315600.1	Wheat	plastid	93.12	92.15
TraesCS6A01G286600.1	Wheat	nucleus	93.52	91.46
Os09t0551300-02	Rice	nucleus	69.44	75.11
Os02t0724600-01	Rice	nucleus	68.39	74.6
Zm00001d051652_P003	Maize	plasma membrane	67.86	71.45
KXG30856	Sorghum	nucleus, plastid	65.34	71.39
Zm00001d017887_P004	Maize	plastid	67.99	70.03
GSMUA_Achr7P20140_001	Banana	nucleus	50.4	63.61
VIT_19s0015g00840.t01	Wine grape	nucleus	19.58	57.59
KRG98455	Soybean	nucleus	47.09	57.42
KRH46413	Soybean	nucleus	46.56	57.33
VIT_19s0015g00830.t01	Wine grape	nucleus	26.59	55.83
PGSC0003DMT400057532	Potato	nucleus	46.16	54.79
CDX94307	Canola	plastid	45.37	53.85
CDX89321	Canola	plastid	44.71	52.9
Bra026418.1-P	Field mustard	plastid	44.84	52.89
KRH75188	Soybean	cytosol	21.3	51.44
CDY06550	Canola	nucleus	42.99	51.34
Bra035594.1-P	Field mustard	nucleus	43.39	51.25
CDY68035	Canola	nucleus	43.65	51.0
CDY28628	Canola	nucleus	43.52	50.23
Solyc07g052110.2.1	Tomato	nucleus	46.69	50.0
AT5G55920.1	Thale cress	nucleus	44.84	49.71
Bra002867.1-P	Field mustard	mitochondrion, nucleus	42.99	49.32
CDY17367	Canola	mitochondrion, nucleus	43.25	48.88
CDX91690	Canola	cytosol, plastid	13.23	48.78
AT4G26600.5	Thale cress	plastid	44.71	48.15
CDY62126	Canola	cytosol	14.15	46.72
CDY65896	Canola	nucleus	14.02	46.49
CDY17518	Canola	cytosol	12.3	45.37
CDY06532	Canola	cytosol	21.56	43.58
HORVU5Hr1G071070.1	Barley	plastid	13.62	17.88
HORVU6Hr1G038870.11	Barley	cytosol	10.85	15.62
HORVU6Hr1G034260.1	Barley	extracellular	1.32	14.49
HORVU4Hr1G010180.10	Barley	cytosol	12.57	13.14
HORVU5Hr1G070390.9	Barley	cytosol, nucleus, plastid	13.49	11.56

Protein Annotations

MapMan:17.1.2.2.3.6	Gene3D:3.30.70.3130	Gene3D:3.40.50.150	ncoils:Coil	InterPro:Fmu/NOL1/Nop2p_CS	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0005488	GO:GO:0006139	GO:GO:0006364
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008757	GO:GO:0009987	GO:GO:0016740
GO:GO:0032259	EnsemblPlantsGene:HORVU6Hr1G072030	EnsemblPlants:HORVU6Hr1G072030.1	InterPro:IPR001678	UniProt:M0WTL8	InterPro:MeTrfase_RsmB/NOP2
InterPro:Methyltr_RsmF_N	InterPro:Nop2p	PFAM:PF01189	PFAM:PF17125	PRINTS:PR02008	PRINTS:PR02012
ScanProsite:PS01153	PFscan:PS51686	PANTHER:PTHR22807	PANTHER:PTHR22807:SF30	InterPro:RCMT	InterPro:RCMT_NOP2
InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	TIGRFAMs:TIGR00446	UniParc:UPI0002958805	SEG:seg	:

Description

No Description!

Coordinates

chrchr6H:+:500699759..500705154

Molecular Weight (calculated)

83461.4 Da

IEP (calculated)

5.117

GRAVY (calculated)

-0.920

Length

756 amino acids

Sequence
(BLAST)

001: MARKVAQRRP AAPPAPPVAK KVVKVPSRTA KRAAPKKQKL PEPSSSDDSE AEQPLHEEEE EEDSDVEAPS DSDAEELSGS DADGVEDDDD DDEDDEDEDV
101: EDDDPLAGDF LAGSDDDSDE GGDSGEESDG SGDLEARSAA LDRQKEQAEE DAAADLALNI RSESDEFRLP TKEELEEEAL GPPNLPNLKR RISEIVRVLS
201: NFSKLRQENV ARKDYVDQFK TDVMAYYGYN EFLIEAFVEM FPAVEVVELL ESFEKRPPEC LRTNTLKTRR RDLAAALIPR GFNLDPIGKW SKVGLVVYDS
301: SVSSGATVEY MAGHYMKQGA SSFLPVMALA PQEKERIVDM AAAPGGKTTY IGALMKNTGI IYANELNEKR LHGLLGNIHR LGVTNTIVCN YDGKELPKVL
401: GMNSVDRVLL DAPCTGTGTV WKDAQIKTSK DIDDIRNCAF VQKQLLLAAI DLVDANSKTG GYIVYSTCSM MIPENEAVID YALKKRDVKV VPCGLDFGRP
501: GFIRFREHRF HTSLDKTRRF YPHVNNMDGF FVAKLKKMSN TIPASSESSK EPEEAAEGVV DPNHDEEDEK DVPDRQPTKS KNHKQGKKKN EQASTPEGEG
601: DQSQAPERPA KQLKNNKGVK KSSGPKSAEM NGDKKETGNE QTEQVKSHKG SKKIKGPKDA GMDVDEKETP SEQTEQVKSH KGAKRSNGPK STAINGEKRD
701: GPASDKIKKS GSKSASGSLM KEKKPVSKEG NKKRKWQFKL RRDWEAKQKS EKRAKV

Best Arabidopsis Sequence Match ( AT4G26600.1 )
(BLAST)

001: MAALTRNKKK GSNSQTPPLN KQTKASPLKK AAKTQKPPLK KQRKCISEKK PLKKPEVSTD EEEEEEENEQ SDEGSESGSD LFSDGDEEGN NDSDDDDDDD
101: DDDDDDDEDA EPLAEDFLDG SDNEEVTMGS DLDSDSGGSK LERKSRAIDR KRKKEVQDAD DEFKMNIKEK PDEFQLPTQK ELEEEARRPP DLPSLQMRIR
201: EIVRILSNFK DLKPKGDKHE RNDYVGQLKA DLSSYYGYNE FLIGTLIEMF PVVELMELIE AFEKKRPTSI RTNTLKTRRR DLADILLNRG VNLDPLSKWS
301: KVGLIVYDSQ VPIGATPEYL AGFYMLQSAS SFLPVMALAP REKERVVDMA AAPGGKTTYV AALMKNTGII YANEMKVPRL KSLSANLHRM GVTNTIVCNY
401: DGRELTKVLG QSSVDRVLLD APCSGTGVIS KDESVKTSKS ADDIKKFAHL QKQLILGAID LVDANSKTGG YIVYSTCSVM IPENEAVIDY ALKNRDVKLV
501: PCGLDFGRPG FSSFREHRFH PSLEKTRRFY PHVHNMDGFF VAKLKKMSNA MQPSGNDEPA VTMEQAQVSS SDDDDEKAEA IEELEKPPVA SGQPKRESNT
601: KEDTNKRKNP RSKEIHKGKR NKNTKTESGN VEEPRKQKKK RSQWKNEIAQ AREEKRKTMR ENAKETPKHR G

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:TAIR;Acc:AT4G26600]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.