CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 3
mitochondrion 2
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d051652_P003	Maize	plasma membrane	89.31	86.07
Zm00001d017887_P004	Maize	plastid	90.9	85.69
Os02t0724600-01	Rice	nucleus	73.7	73.59
Os09t0551300-02	Rice	nucleus	73.99	73.25
TraesCS6B01G315600.1	Wheat	plastid	72.54	65.71
TraesCS6D01G267300.1	Wheat	plastid	72.69	65.58
HORVU6Hr1G072030.1	Barley	plastid	71.39	65.34
TraesCS6A01G286600.1	Wheat	nucleus	72.83	65.2
GSMUA_Achr7P20140_001	Banana	nucleus	55.64	64.27
VIT_19s0015g00840.t01	Wine grape	nucleus	22.4	60.31
KRG98455	Soybean	nucleus	51.3	57.26
KRH46413	Soybean	nucleus	50.72	57.17
VIT_19s0015g00830.t01	Wine grape	nucleus	28.61	55.0
CDX94307	Canola	plastid	49.71	54.0
PGSC0003DMT400057532	Potato	nucleus	49.71	54.0
CDX89321	Canola	plastid	49.57	53.68
Bra026418.1-P	Field mustard	plastid	49.13	53.04
Bra035594.1-P	Field mustard	nucleus	47.83	51.72
CDY06550	Canola	nucleus	47.25	51.66
CDY68035	Canola	nucleus	48.12	51.47
KRH75188	Soybean	cytosol	23.12	51.12
CDY28628	Canola	nucleus	48.27	50.99
CDX91690	Canola	cytosol, plastid	15.03	50.73
Bra002867.1-P	Field mustard	mitochondrion, nucleus	47.98	50.38
AT5G55920.1	Thale cress	nucleus	48.84	49.56
CDY17367	Canola	mitochondrion, nucleus	47.83	49.48
Solyc07g052110.2.1	Tomato	nucleus	50.14	49.15
AT4G26600.5	Thale cress	plastid	49.71	49.0
CDY62126	Canola	cytosol	16.18	48.91
CDY65896	Canola	nucleus	16.04	48.68
CDY17518	Canola	cytosol	13.87	46.83
CDY06532	Canola	cytosol	23.41	43.32
OQU89660	Sorghum	plastid	16.62	20.03
KXG29808	Sorghum	plastid	13.15	18.31
KXG25732	Sorghum	mitochondrion	15.03	12.31
EER96904	Sorghum	nucleus	14.74	11.67

Protein Annotations

MapMan:17.1.2.2.3.6	Gene3D:3.30.70.3130	Gene3D:3.40.50.150	UniProt:A0A194YRP1	ncoils:Coil	InterPro:Fmu/NOL1/Nop2p_CS
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0005488	GO:GO:0006139
GO:GO:0006364	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008757	GO:GO:0009987
GO:GO:0016740	GO:GO:0032259	InterPro:IPR001678	EnsemblPlants:KXG30856	ProteinID:KXG30856	ProteinID:KXG30856.1
InterPro:MeTrfase_RsmB/NOP2	InterPro:Methyltr_RsmF_N	InterPro:Nop2p	PFAM:PF01189	PFAM:PF17125	PRINTS:PR02008
PRINTS:PR02012	ScanProsite:PS01153	PFscan:PS51686	PANTHER:PTHR22807	PANTHER:PTHR22807:SF30	MetaCyc:PWY-6825
InterPro:RCMT	InterPro:RCMT_NOP2	InterPro:SAM-dependent_MTases	EnsemblPlantsGene:SORBI_3004G256000	SUPFAM:SSF53335	TIGRFAMs:TIGR00446
UniParc:UPI0007F29681	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:60196442..60202079

Molecular Weight (calculated)

77324.8 Da

IEP (calculated)

5.426

GRAVY (calculated)

-0.880

Length

692 amino acids

Sequence
(BLAST)

001: MAKRKQQPPP PAPTAKKGSK VVPPPKALPL PEEDSDLDVS DAEELSLSDA EADELSGSDA DADGGSSSGD DVEEEEEDEE EEGDESDDEP LADDFLAGSD
101: EGSDGGDSGL ESDESDDLEA KSRAIDEQKL KAEEDAEKEL QINIRSESDE FRLPTAEELE EEAHRPPNLP NLKRRISEIV RVLSNFSKLR QKDVPRKDYI
201: NQLKTDIMSY YGYNDFLVEA LIEMFPAVEL VELLEAFEKR PPECLRTNTL KTRRRDLAAA LIPRGFNLDP IGKWSKVGLV VYDSTISAGA TTEYMAGHYM
301: KQGASSFLPV MALAPQEKER IVDMAAAPGG KTTYIGALMK NTGIIYANEF NEKRLHGLLG NIHRMGVTNT IVSNYDGKEL PKVLGMNSVD RVLLDAPCTG
401: TGTIWKDLQI KTSKDIEDIR NCAFVQKQLL LAAIDLVDAN SKTGGYIVYS TCSIMIPENE AVIDYALKKR NVKLVPCGLD FGRPGFIRYR EHRFHTSLEK
501: TRRFYPHVNN MDGFFVAKLK KLSNTIPVTS EPSKASEEAA EKADGEDEKA ISNEQETAVP GEDEKTVQMK NQKKAKVTNK RTSVTKDTGG HKHESNRPGK
601: HLKKNKDKDT KEIDGPESTE TNGDRKEEHR EQTKQRSHKR KFASNNSKKA GPESNLGVKE KRQVSDKKPK RKFKLRREWE AEKKKDAKRR KI

Best Arabidopsis Sequence Match ( AT4G26600.1 )
(BLAST)

001: MAALTRNKKK GSNSQTPPLN KQTKASPLKK AAKTQKPPLK KQRKCISEKK PLKKPEVSTD EEEEEEENEQ SDEGSESGSD LFSDGDEEGN NDSDDDDDDD
101: DDDDDDDEDA EPLAEDFLDG SDNEEVTMGS DLDSDSGGSK LERKSRAIDR KRKKEVQDAD DEFKMNIKEK PDEFQLPTQK ELEEEARRPP DLPSLQMRIR
201: EIVRILSNFK DLKPKGDKHE RNDYVGQLKA DLSSYYGYNE FLIGTLIEMF PVVELMELIE AFEKKRPTSI RTNTLKTRRR DLADILLNRG VNLDPLSKWS
301: KVGLIVYDSQ VPIGATPEYL AGFYMLQSAS SFLPVMALAP REKERVVDMA AAPGGKTTYV AALMKNTGII YANEMKVPRL KSLSANLHRM GVTNTIVCNY
401: DGRELTKVLG QSSVDRVLLD APCSGTGVIS KDESVKTSKS ADDIKKFAHL QKQLILGAID LVDANSKTGG YIVYSTCSVM IPENEAVIDY ALKNRDVKLV
501: PCGLDFGRPG FSSFREHRFH PSLEKTRRFY PHVHNMDGFF VAKLKKMSNA MQPSGNDEPA VTMEQAQVSS SDDDDEKAEA IEELEKPPVA SGQPKRESNT
601: KEDTNKRKNP RSKEIHKGKR NKNTKTESGN VEEPRKQKKK RSQWKNEIAQ AREEKRKTMR ENAKETPKHR G

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:TAIR;Acc:AT4G26600]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.