Factsheet for Solyc08g062440.1.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 2
endoplasmic reticulum 5
extracellular 3
vacuole 3
plasma membrane 4
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g062560.2.1	Tomato	nucleus	66.05	30.87
PGSC0003DMT400021199	Potato	cytosol, plastid	66.51	29.73
Bra036564.1-P	Field mustard	mitochondrion	49.77	22.11
CDX87063	Canola	plastid	49.77	22.11
CDY19785	Canola	plastid	49.77	22.11
CDY05536	Canola	plastid	50.23	22.09
Bra020544.1-P	Field mustard	mitochondrion, plastid	49.77	21.88
CDY24989	Canola	plastid	49.3	21.68
VIT_04s0008g01480.t01	Wine grape	plastid	51.16	21.65
KRH52232	Soybean	nucleus	47.44	20.77
KRH61558	Soybean	nucleus	46.51	20.24
AT5G26180.3	Thale cress	plastid	46.98	17.81
Zm00001d016374_P002	Maize	cytosol, plastid	40.93	17.67
KXG29808	Sorghum	plastid	40.47	17.5
GSMUA_Achr5P24950_001	Banana	mitochondrion	41.4	17.35
TraesCS6A01G183400.2	Wheat	plastid	40.0	17.0
TraesCS6B01G213900.2	Wheat	plastid	40.0	17.0
TraesCS6D01G171500.1	Wheat	plastid	40.0	17.0
Os02t0217800-00	Rice	plastid	39.07	16.63
HORVU6Hr1G038870.11	Barley	cytosol	39.53	16.19
Solyc12g015710.1.1	Tomato	cytosol	16.74	6.38
Solyc07g052110.2.1	Tomato	nucleus	17.21	5.24
Solyc05g051520.2.1	Tomato	nucleus	11.63	3.04
Solyc11g010110.1.1	Tomato	nucleus	11.16	2.73

Protein Annotations

Gene3D:3.40.50.150	MapMan:35.2	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005730
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008173	GO:GO:0008757
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0032259	GO:GO:0070475
InterPro:IPR001678	UniProt:K4CL32	InterPro:MeTrfase_RsmB/NOP2	PFAM:PF01189	PFscan:PS51686	PANTHER:PTHR22807
PANTHER:PTHR22807:SF4	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	EnsemblPlantsGene:Solyc08g062440.1	EnsemblPlants:Solyc08g062440.1.1	TMHMM:TMhelix
UniParc:UPI000276B0CA	:	:	:	:	:

Description

No Description!

Coordinates

chr8:+:51099311..51101285

Molecular Weight (calculated)

25013.5 Da

IEP (calculated)

9.309

GRAVY (calculated)

0.261

Length

215 amino acids

Sequence
(BLAST)

001: MLLHRQEELM YIILYDILFS QEALLAGDAE KFLLQKKDVL QAAPAKLLVR KKMEKYLYLK LCWITLGVFI IIWSRKNSLR CVTGIFFFIF LADLPKSRYA
101: RVNTLKMDVE SALVEFKKHY EVFQDAMVPD LLIIPPMTDL HDHPLVIDAC AAPRNKTVHL AALMKGNGKI IVFELNEERV KRLKDTVELA RPISILLMAF
201: WYPIHLLRKI ATEEI

Best Arabidopsis Sequence Match ( AT5G26180.5 )
(BLAST)

001: MVARRNKPKA PLVKHRFSGG DSHKPKPPPA TKQPFSGVES HKPKTSPATK QKFSGVESHK PKTPPGKQRF SGAESRKPKT PPATKQKFSS LERSALYARR
101: EAANILRTVL RGDAERRAVA SIKSLVLSPS VRNKRGTFAL VCETLKYLTV IKDVLDIANV LNSKWKRQEP LVFIVCYDIL FGKDTPSIGD AEKFLMRHKE
201: ALLSGLATLL VRKKVDSVDQ LLGSKLTGHL KPRYVRVNTL KMDVDSAVQE LEKHYTVQKD ETVPDLLVLP PGSDLHAHRL VANGRIFLQG KASSMVAAAL
301: QPQAGWEVLD ACSAPGNKTI HLAALMEGQG KIIACELNEE RVKRLEHTIK LSGASNIEVC HGDFLGLNPK DPSFAKIRAI LLDPSCSGSG TITDRLDHLL
401: PSHSEDNNMN YDSMRLHKLA VFQKKALAHA LSFPKVERVV YSTCSIYQIE NEDVVSSVLP LASSLGFKLA TPFPQWQRRG LPVFAGSEHL LRMDPVEDKE
501: GFFIALFVRA NKLDNPKSSE LPDRVCRRRP KERTMQLHPY LCPKMFRAWS GTLHRLKTRF LLSRNGC

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8GYE8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.