Factsheet for AT5G10710.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78396	Canola	endoplasmic reticulum, golgi	77.24	70.06
CDX70366	Canola	endoplasmic reticulum, extracellular, golgi	78.21	68.54
Bra006073.1-P	Field mustard	endoplasmic reticulum	76.6	65.66
PGSC0003DMT400004637	Potato	cytosol	61.54	59.63
VIT_04s0008g02440.t01	Wine grape	nucleus	61.86	59.2
Solyc08g077520.2.1	Tomato	cytosol, nucleus	60.26	58.39
KRH52593	Soybean	nucleus	59.94	53.12
KRH61930	Soybean	nucleus	60.26	52.81
HORVU6Hr1G002620.4	Barley	cytosol	33.33	52.0
GSMUA_AchrUn_...	Banana	cytosol	27.88	51.79
KXG38548	Sorghum	cytosol	52.56	51.73
TraesCS6A01G013400.1	Wheat	cytosol	52.88	48.67
TraesCS6B01G020300.2	Wheat	nucleus	52.24	47.94
TraesCS6D01G016500.1	Wheat	cytosol	51.92	47.79
Zm00001d032978_P001	Maize	cytosol	23.72	47.74
HORVU6Hr1G002520.13	Barley	cytosol, nucleus	52.24	47.38
GSMUA_AchrUn_...	Banana	cytosol	22.44	46.36
Os04t0284100-01	Rice	cytosol	15.71	45.37
TraesCS3D01G493500.1	Wheat	cytosol, extracellular, plastid	15.38	40.34

Protein Annotations

MapMan:35.2	EntrezGene:830936	ProteinID:AED91586.1	ArrayExpress:AT5G10710	EnsemblPlantsGene:AT5G10710	RefSeq:AT5G10710
TAIR:AT5G10710	RefSeq:AT5G10710-TAIR-G	EnsemblPlants:AT5G10710.1	TAIR:AT5G10710.1	Unigene:At.10126	EMBL:BT002314
InterPro:CENP-O	ncoils:Coil	GO:GO:0000776	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0034508	RefSeq:NP_568235.1	PFAM:PF09496
PO:PO:0000013	PO:PO:0000037	PO:PO:0000084	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054
PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095
PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025
PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047
PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022
PO:PO:0025281	PANTHER:PTHR14582	UniProt:Q8GUP4	UniParc:UPI00000AE1DB	:	:

Description

Centromere protein O [Source:UniProtKB/TrEMBL;Acc:Q8GUP4]

Coordinates

chr5:+:3378956..3382866

Molecular Weight (calculated)

36023.3 Da

IEP (calculated)

5.440

GRAVY (calculated)

-0.355

Length

312 amino acids

Sequence
(BLAST)

001: MGEMIVSMDQ DIRLDTTRAR LSNLLKRHRE LSDRLTRDSD KTMLDRLNKE FEAARRSQSQ EVFLDGEEWN DGLLATLRER VHMEADRKAD NGNAGFSLVC
101: HPEERITYRV GNKVICCLDG SRIGIQFETS TAGETYEVYH CVLESKSFLE KMIVLEHTIP FFLPLSDLEN DLLFSNAKKF IDNVGDLLQA YVDRKEQVRL
201: IKELFGHQIS EIYHSLPYHM IEFSMDDCDC KFVVSLRYGD LLCELPTKVR ILVWPMHHLS KKQCTSPGSP AIPVRLPFAE DAFRIQSLPE AYAEIMPNMP
301: NEIRQLFQTS PS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.