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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 8
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:cytosol
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY53114 Canola cytosol, plastid 78.73 78.23
CDY44587 Canola plastid 77.14 76.42
Bra025602.1-P Field mustard plastid 73.02 71.65
CDY44589 Canola cytosol, endoplasmic reticulum, vacuole 26.98 67.46
HORVU7Hr1G028070.1 Barley cytosol 22.54 65.74
VIT_14s0066g01750.t01 Wine grape plastid 55.24 54.04
PGSC0003DMT400007012 Potato plastid 53.65 52.81
Solyc09g009290.2.1 Tomato plastid 53.02 52.68
TraesCS7A01G193000.1 Wheat plastid 50.48 51.79
TraesCS7B01G098300.1 Wheat plastid 49.84 51.48
TraesCS4B01G183600.1 Wheat plastid 49.52 51.15
HORVU7Hr1G039330.1 Barley plastid 50.16 51.13
Zm00001d053962_P002 Maize plastid 48.25 50.84
EES04435 Sorghum plastid 47.94 50.5
KRH20044 Soybean plastid 52.7 50.3
TraesCS7D01G194200.1 Wheat plastid 49.21 50.0
KRG98009 Soybean cytosol, plastid 49.84 47.43
GSMUA_Achr9P18260_001 Banana plastid 50.48 46.09
AT5G66055.1 Thale cress plastid 28.89 20.92
Protein Annotations
Gene3D:1.25.40.20MapMan:35.1EntrezGene:834014ProteinID:AED94515.1EMBL:AF026167ArrayExpress:AT5G40160
EnsemblPlantsGene:AT5G40160RefSeq:AT5G40160TAIR:AT5G40160RefSeq:AT5G40160-TAIR-GEnsemblPlants:AT5G40160.1TAIR:AT5G40160.1
EMBL:AY063792EMBL:AY117280InterPro:Ankyrin_rptInterPro:Ankyrin_rpt-contain_domInterPro:Ankyrin_rpt-contain_sfProteinID:BAB10897.1
Symbol:EMB139GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0009507GO:GO:0009536InterPro:IPR002110InterPro:IPR020683
InterPro:IPR036770RefSeq:NP_198832.1PFAM:PF12796PO:PO:0000013PO:PO:0000037PO:PO:0000230
PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507
PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123
PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009
PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032
PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100
PO:PO:0020137PO:PO:0025022PO:PO:0025281PFscan:PS50088PFscan:PS50297PANTHER:PTHR45194
UniProt:Q9SQK3SMART:SM00248SUPFAM:SSF48403UniParc:UPI00000A02A1SEG:seg:
Description
EMB506Ankyrin repeat domain-containing protein EMB506, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SQK3]
Coordinates
chr5:-:16062479..16064689
Molecular Weight (calculated)
35462.9 Da
IEP (calculated)
4.875
GRAVY (calculated)
-0.603
Length
315 amino acids
Sequence
(BLAST)
001: MVSSVLSIPP QTCLLPRLPI SDSVNCKSKI VYCLSTSVRG SSVKRQSTAR TRSFTETNRR TPSVQSKHEF WEDPDDGSDS ENEYEGEEED GIGNDLDNES
101: DWEDDSRVQK LTTTDNYEEE LAKEVEQLLE PEERVILQQN EKPNLKMIST KSWKPLQTLA LSMQIQLMDN LIENGLDIDD VDKDNQTALH KAIIGKKEAV
201: ISHLLRKGAN PHLQDRDGAA PIHYAVQVGA LQTVKLLFKY NVDVNVADNE GWTPLHIAVQ SRNRDITKIL LTNGADKTRR TKDGKLALDL ALCFGRDFKS
301: YDLVKLLKIM PTGDI
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.