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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 6
  • cytosol 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:cytosol
Predotar:plastid
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS2A01G282700.1
TraesCS2B01G300000.1
TraesCS2D01G281400.1
TraesCS4B01G331800.1
TraesCS4D01G328600.1
TraesCS5A01G503200.2
TraesCS6A01G118800.2
TraesCS6B01G146800.2
TraesCS6D01G108700.2
TraesCS7A01G423100.2
TraesCS7B01G323600.1
TraesCS7D01G416000.2

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G40160.1 TraesCS6A01G118800.2 AT3G21175.1 21798944
AT5G40160.1 TraesCS6B01G146800.2 AT3G21175.1 21798944
AT5G40160.1 TraesCS6D01G108700.2 AT3G21175.1 21798944
AT5G40160.1 TraesCS7A01G423100.2 AT3G21175.1 21798944
AT5G40160.1 TraesCS7B01G323600.1 AT3G21175.1 21798944
AT5G40160.1 TraesCS7D01G416000.2 AT3G21175.1 21798944
AT5G40160.1 TraesCS2A01G282700.1 AT3G48550.1 21798944
AT5G40160.1 TraesCS2B01G300000.1 AT3G48550.1 21798944
AT5G40160.1 TraesCS2D01G281400.1 AT3G48550.1 21798944
AT5G40160.1 TraesCS4B01G331800.1 AT5G66055.1 17092312
AT5G40160.1 TraesCS4D01G328600.1 AT5G66055.1 17092312
AT5G40160.1 TraesCS5A01G503200.2 AT5G66055.1 17092312
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7B01G098300.1 Wheat plastid 98.69 98.69
TraesCS7A01G193000.1 Wheat plastid 89.18 88.6
HORVU7Hr1G028070.1 Barley cytosol 31.15 87.96
TraesCS7D01G194200.1 Wheat plastid 88.52 87.1
HORVU7Hr1G039330.1 Barley plastid 86.56 85.44
EES04435 Sorghum plastid 67.54 68.9
Zm00001d053962_P002 Maize plastid 66.23 67.56
CDY44589 Canola cytosol, endoplasmic reticulum, vacuole 25.57 61.9
CDY44587 Canola plastid 53.11 50.94
CDY53114 Canola cytosol, plastid 52.79 50.79
VIT_14s0066g01750.t01 Wine grape plastid 53.11 50.31
Bra025602.1-P Field mustard plastid 52.79 50.16
AT5G40160.1 Thale cress plastid 51.15 49.52
PGSC0003DMT400007012 Potato plastid 51.8 49.38
Solyc09g009290.2.1 Tomato plastid 50.82 48.9
GSMUA_Achr9P18260_001 Banana plastid 53.44 47.25
KRG98009 Soybean cytosol, plastid 50.49 46.53
KRH20044 Soybean plastid 49.18 45.45
TraesCS4B01G331800.1 Wheat plastid 34.75 22.65
Protein Annotations
EnsemblPlants:TraesCS4B01G183600.1EnsemblPlantsGene:TraesCS4B01G183600Gene3D:1.25.40.20GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:Ankyrin_rptInterPro:Ankyrin_rpt-contain_domInterPro:Ankyrin_rpt-contain_sfInterPro:IPR002110InterPro:IPR020683InterPro:IPR036770
PANTHER:PTHR45194PFAM:PF12796PFscan:PS50088PFscan:PS50297SEG:segSMART:SM00248
SUPFAM:SSF48403TIGR:cd00204MapMan:35.1:::
Description
No Description!
Coordinates
chr4B:-:402986253..402988480
Molecular Weight (calculated)
33638.1 Da
IEP (calculated)
7.878
GRAVY (calculated)
-0.407
Length
305 amino acids
Sequence
(BLAST)
001: MLPWAATASS AAAAALLHAS PRPASHRDAL PHYRPSPSLP PPLSIAFRAP ARALPRGGDA FWEEPDDGSG SDYEDNGKQA TVQRSSPFPS PLPLSRLVAR
101: RQQEREEQEL RREIELLLTP EEESILDQNE TADVTKISSP KWHPLHTYAL ALQIPLMDKL LDNGVDIDLV DKDGFTPLHK AIIGKKEAVI SHLLRKGANP
201: HVTDRDGATP LHYAVQVGAL QTVKLLIKYR VDVNVADVDG WTPLHLAVQS RNRDITKILL VNGADQTRRT NGGKTPLDLS LCFRRDFNSY DLAKLLKLVP
301: ANRGV
Best Arabidopsis Sequence Match ( AT5G40160.1 )
(BLAST)
001: MVSSVLSIPP QTCLLPRLPI SDSVNCKSKI VYCLSTSVRG SSVKRQSTAR TRSFTETNRR TPSVQSKHEF WEDPDDGSDS ENEYEGEEED GIGNDLDNES
101: DWEDDSRVQK LTTTDNYEEE LAKEVEQLLE PEERVILQQN EKPNLKMIST KSWKPLQTLA LSMQIQLMDN LIENGLDIDD VDKDNQTALH KAIIGKKEAV
201: ISHLLRKGAN PHLQDRDGAA PIHYAVQVGA LQTVKLLFKY NVDVNVADNE GWTPLHIAVQ SRNRDITKIL LTNGADKTRR TKDGKLALDL ALCFGRDFKS
301: YDLVKLLKIM PTGDI
Arabidopsis Description
EMB506Ankyrin repeat domain-containing protein EMB506, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SQK3]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.