Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS4D01G328600.1 | Wheat | plastid | 90.87 | 94.27 |
TraesCS4B01G331800.1 | Wheat | plastid | 93.63 | 94.23 |
HORVU4Hr1G080940.1 | Barley | plastid | 88.96 | 87.11 |
Os03t0135600-01 | Rice | plastid | 66.88 | 71.43 |
OQU93284 | Sorghum | plastid | 63.27 | 68.51 |
Zm00001d027544_P001 | Maize | plastid | 61.78 | 67.52 |
Bra037188.1-P | Field mustard | mitochondrion | 24.63 | 60.1 |
KRH76586 | Soybean | extracellular | 16.14 | 57.14 |
KRH16661 | Soybean | cytosol, vacuole | 5.1 | 54.55 |
GSMUA_Achr4P29610_001 | Banana | plastid | 47.56 | 53.33 |
KRH76587 | Soybean | plastid | 41.4 | 44.12 |
KRH28866 | Soybean | plastid | 41.4 | 43.92 |
VIT_00s0264g00130.t01 | Wine grape | cytosol, plastid | 44.16 | 43.88 |
PGSC0003DMT400022381 | Potato | plastid | 41.61 | 43.36 |
Solyc02g061820.2.1 | Tomato | plastid | 41.19 | 42.83 |
AT5G66055.1 | Thale cress | plastid | 38.22 | 41.38 |
CDX81417 | Canola | plastid | 38.0 | 41.34 |
CDY18585 | Canola | plastid | 36.94 | 40.85 |
KRH28867 | Soybean | plastid | 35.88 | 40.14 |
TraesCS7A01G193000.1 | Wheat | plastid | 23.14 | 35.5 |
Protein Annotations
Gene3D:1.25.40.20 | MapMan:35.1 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | GO:GO:0003674 |
GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
GO:GO:0009507 | GO:GO:0009536 | InterPro:IPR002110 | InterPro:IPR020683 | InterPro:IPR036770 | PFAM:PF13637 |
PIRSF:PIRSF000654 | PFscan:PS50088 | PFscan:PS50297 | PANTHER:PTHR45194 | SMART:SM00248 | SUPFAM:SSF48403 |
EnsemblPlantsGene:TraesCS5A01G503200 | EnsemblPlants:TraesCS5A01G503200.2 | TIGR:cd00204 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr5A:-:668158785..668162928
Molecular Weight (calculated)
52317.6 Da
IEP (calculated)
8.152
GRAVY (calculated)
-0.414
Length
471 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPPSLPLLL PFSSPILHPL PTSASRLRTP GRSLSLSRCP RPLASPPPSF AVAAVNDDEH DYDDDVVLGD CLVFEDEAFE APDLDLGLGR PSSHPSRKRP
101: AARGGGSLVP ERWKDAVEEI NLTKKEKRRI AHGLRFGSRL DRRVPSAVAA PDEYRAYREG RLDAELGHGA RDYLVSPLES RSRAYSEVRL DAEPGRVASN
201: HVEPLEEMSL APEKVEAPPP PPPGTRAAPR NPRTAMDSVS LEDIAELFNS SQYVPGETED GKSARSRRKL FTDEEKVLLN RRLPDLEGAA SSKWLPLHTL
301: AASGDFYLLD NLLKHKVDVN ALDKDGLPAI HKAIISKKHA IINYLLRNSA NPSVCDRIFA LVLLFCVKDG ATLMHYAVQT ACNQTIKTLL LYNVDINRPD
401: DYGWTPLHLA VQTQRTDIVR LLLLKGANRT LKNQDGLTPL DLCLRLGHDV RTYELIKLLK NFRISKQHNS F
101: AARGGGSLVP ERWKDAVEEI NLTKKEKRRI AHGLRFGSRL DRRVPSAVAA PDEYRAYREG RLDAELGHGA RDYLVSPLES RSRAYSEVRL DAEPGRVASN
201: HVEPLEEMSL APEKVEAPPP PPPGTRAAPR NPRTAMDSVS LEDIAELFNS SQYVPGETED GKSARSRRKL FTDEEKVLLN RRLPDLEGAA SSKWLPLHTL
301: AASGDFYLLD NLLKHKVDVN ALDKDGLPAI HKAIISKKHA IINYLLRNSA NPSVCDRIFA LVLLFCVKDG ATLMHYAVQT ACNQTIKTLL LYNVDINRPD
401: DYGWTPLHLA VQTQRTDIVR LLLLKGANRT LKNQDGLTPL DLCLRLGHDV RTYELIKLLK NFRISKQHNS F
001: MQSLSTPHTI SLLLPRTSPS RLSPSLHSLA FPTRLRSLSY SSQTSILPDA GDDFIVGDCL VYEDGVFEDP YLDKEVTQVA KQERKKNRRG GAKRLDESEI
101: EPENLVPEEW RDIQAEVNLT KKDKRKIAQE MEFGVRVEKK RQGLIPLRKV DLNDFLTYKE AKLAQLRPVI LDKPGNFSDD SGASSDGETA VSSPSERVAP
201: KNPRWAVYGK GFDHVAKFFN SDKYDPSDKK SDGPRKLLSK EEKFMLNSRN PDLAVATSKK WLPLHTLAAC GEFYLVDSLL KHNLDINATD VGGLTVLHRA
301: IIGKKQAITN YLLRESANPF VLDDEGATLM HYAVQTASAP TIKLLLLYNA DINAQDRDGW TPLHVAVQAR RSDIVKLLLI KGADIEVKNK DGLTPLGLCL
401: YLGREIRTYE VMKLLKEFPL SRHKKRLVTT DEDIE
101: EPENLVPEEW RDIQAEVNLT KKDKRKIAQE MEFGVRVEKK RQGLIPLRKV DLNDFLTYKE AKLAQLRPVI LDKPGNFSDD SGASSDGETA VSSPSERVAP
201: KNPRWAVYGK GFDHVAKFFN SDKYDPSDKK SDGPRKLLSK EEKFMLNSRN PDLAVATSKK WLPLHTLAAC GEFYLVDSLL KHNLDINATD VGGLTVLHRA
301: IIGKKQAITN YLLRESANPF VLDDEGATLM HYAVQTASAP TIKLLLLYNA DINAQDRDGW TPLHVAVQAR RSDIVKLLLI KGADIEVKNK DGLTPLGLCL
401: YLGREIRTYE VMKLLKEFPL SRHKKRLVTT DEDIE
Arabidopsis Description
AKRPAT5G66055 protein [Source:UniProtKB/TrEMBL;Acc:B9DF91]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.