Factsheet for HORVU4Hr1G080940.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU7Hr1G028070.1
HORVU7Hr1G039330.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G66055.1	HORVU7Hr1G028070.1	AT5G40160.1	17092312
AT5G66055.1	HORVU7Hr1G039330.1	AT5G40160.1	17092312

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G328600.1	Wheat	plastid	86.49	91.63
TraesCS5A01G503200.2	Wheat	plastid	87.11	88.96
TraesCS4B01G331800.1	Wheat	plastid	85.45	87.82
Os03t0135600-01	Rice	plastid	65.49	71.43
OQU93284	Sorghum	plastid	61.95	68.51
Zm00001d027544_P001	Maize	plastid	61.33	68.45
Bra037188.1-P	Field mustard	mitochondrion	24.12	60.1
KRH76586	Soybean	extracellular	15.59	56.39
KRH16661	Soybean	cytosol, vacuole	4.99	54.55
GSMUA_Achr4P29610_001	Banana	plastid	45.95	52.62
HORVU7Hr1G028070.1	Barley	cytosol	10.19	45.37
VIT_00s0264g00130.t01	Wine grape	cytosol, plastid	44.49	45.15
KRH76587	Soybean	plastid	40.96	44.57
KRH28866	Soybean	plastid	40.96	44.37
PGSC0003DMT400022381	Potato	plastid	41.16	43.81
Solyc02g061820.2.1	Tomato	plastid	40.75	43.27
CDX81417	Canola	plastid	37.63	41.8
AT5G66055.1	Thale cress	plastid	37.63	41.61
CDY18585	Canola	plastid	36.38	41.08
KRH28867	Soybean	plastid	34.93	39.91
HORVU7Hr1G039330.1	Barley	plastid	21.83	33.98

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.1	UniProt:A0A287PU78	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	EnsemblPlantsGene:HORVU4Hr1G080940	EnsemblPlants:HORVU4Hr1G080940.1	InterPro:IPR002110
InterPro:IPR020683	InterPro:IPR036770	PFAM:PF13637	PIRSF:PIRSF000654	PFscan:PS50088	PFscan:PS50297
PANTHER:PTHR45194	SMART:SM00248	SUPFAM:SSF48403	UniParc:UPI000B46CF86	SEG:seg	:

Description

No Description!

Coordinates

chrchr4H:+:617794026..617798141

Molecular Weight (calculated)

53372.3 Da

IEP (calculated)

7.113

GRAVY (calculated)

-0.516

Length

481 amino acids

Sequence
(BLAST)

001: AQLKRPLTSA YPLGFRRGEE DAMPPPSLSL LLPFSSPIHT LLHPLPTSAS RLRAPGRSIS LSPCARPLAS PSSSFALAAV NDDDDYDDDV VLGDCLVFED
101: EAFETPDLDL DLGRPSSRPS RNGGGSLVPE RWKDAVEEIN LTKKEKRRIA HGLRFGSRLD RRVPSAVAAP DEYLAYREGR LDAELGHGAR DYLESPLESK
201: SRAYSEVRLD AEPGRVARGY VEPLEERSRA PEKVEAPPPP PPPPGTRAAP RNPRAAIDAG GLEDIAELFN SSEYVPGETE DGKSVRSRRK LFTDEEKVLL
301: NRRLPDLEAA SSSKWLPLHT LAASGDFYLL DNLLKHKVDV NALDKDGLPA IHKAIISKKH AIINYLLRNS ANPSGYDRDG ATLMHYAVQT ACNQTIKTLL
401: LYNVDINRPD DYGWTPLHLA VQTQRTDIVR LLLLKGADRT LKNQDGLTPL ELCLRLGHDV RTYELIKLLK NFRISKQRNS F

Best Arabidopsis Sequence Match ( AT5G66055.1 )
(BLAST)

001: MQSLSTPHTI SLLLPRTSPS RLSPSLHSLA FPTRLRSLSY SSQTSILPDA GDDFIVGDCL VYEDGVFEDP YLDKEVTQVA KQERKKNRRG GAKRLDESEI
101: EPENLVPEEW RDIQAEVNLT KKDKRKIAQE MEFGVRVEKK RQGLIPLRKV DLNDFLTYKE AKLAQLRPVI LDKPGNFSDD SGASSDGETA VSSPSERVAP
201: KNPRWAVYGK GFDHVAKFFN SDKYDPSDKK SDGPRKLLSK EEKFMLNSRN PDLAVATSKK WLPLHTLAAC GEFYLVDSLL KHNLDINATD VGGLTVLHRA
301: IIGKKQAITN YLLRESANPF VLDDEGATLM HYAVQTASAP TIKLLLLYNA DINAQDRDGW TPLHVAVQAR RSDIVKLLLI KGADIEVKNK DGLTPLGLCL
401: YLGREIRTYE VMKLLKEFPL SRHKKRLVTT DEDIE

Arabidopsis Description

AKRPAT5G66055 protein [Source:UniProtKB/TrEMBL;Acc:B9DF91]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.