Factsheet for Bra037188.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
cytosol 1
plastid 1
mitochondrion 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra025602.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G66055.1	Bra025602.1-P	AT5G40160.1	17092312

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH76586	Soybean	extracellular	40.93	59.4
KRH16661	Soybean	cytosol, vacuole	13.47	59.09
CDY18585	Canola	plastid	95.34	43.19
AT5G66055.1	Thale cress	plastid	86.53	38.39
KRH28866	Soybean	plastid	66.32	28.83
KRH76587	Soybean	plastid	65.8	28.73
GSMUA_Achr4P29610_001	Banana	plastid	62.18	28.57
KRH28867	Soybean	plastid	62.18	28.5
VIT_00s0264g00130.t01	Wine grape	cytosol, plastid	68.39	27.85
Zm00001d027544_P001	Maize	plastid	61.14	27.38
Solyc02g061820.2.1	Tomato	plastid	64.25	27.37
OQU93284	Sorghum	plastid	61.66	27.36
PGSC0003DMT400022381	Potato	plastid	63.21	26.99
Os03t0135600-01	Rice	plastid	59.59	26.08
TraesCS4D01G328600.1	Wheat	plastid	60.1	25.55
Bra025602.1-P	Field mustard	plastid	41.97	25.23
TraesCS4B01G331800.1	Wheat	plastid	60.62	25.0
TraesCS5A01G503200.2	Wheat	plastid	60.1	24.63
HORVU4Hr1G080940.1	Barley	plastid	60.1	24.12

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	EnsemblPlantsGene:Bra037188
EnsemblPlants:Bra037188.1	EnsemblPlants:Bra037188.1-P	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	InterPro:IPR002110
InterPro:IPR020683	InterPro:IPR036770	UniProt:M4F7X7	PFAM:PF12796	PFAM:PF13637	PFscan:PS50088
PFscan:PS50297	PANTHER:PTHR45194	SMART:SM00248	SUPFAM:SSF48403	UniParc:UPI0002541C33	:

Description

AT5G66055 (E=1e-091) EMB2036, AKRP | AKRP (ANKYRIN REPEAT PROTEIN); protein binding

Coordinates

chrA09:-:4093903..4094871

Molecular Weight (calculated)

21412.2 Da

IEP (calculated)

9.799

GRAVY (calculated)

0.019

Length

193 amino acids

Sequence
(BLAST)

001: MLNSRNPHIA VATSKKWLPL HTLAASGEFY LVDSLLKHNL DINATDVGGL TALHRAIIGK KQAITNYLLR ESANPFVLDD EGATLMHYAV QTASAPTIKL
101: LLLYNADINA QDRDGWTPLH VAVQARRSDI VKLLLIKGAD IQVKNKASSI TFPLDGLTPL GLCLYLGRET RTYEVLIMLK EFPRSRLKRL VTD

Best Arabidopsis Sequence Match ( AT5G66055.1 )
(BLAST)

001: MQSLSTPHTI SLLLPRTSPS RLSPSLHSLA FPTRLRSLSY SSQTSILPDA GDDFIVGDCL VYEDGVFEDP YLDKEVTQVA KQERKKNRRG GAKRLDESEI
101: EPENLVPEEW RDIQAEVNLT KKDKRKIAQE MEFGVRVEKK RQGLIPLRKV DLNDFLTYKE AKLAQLRPVI LDKPGNFSDD SGASSDGETA VSSPSERVAP
201: KNPRWAVYGK GFDHVAKFFN SDKYDPSDKK SDGPRKLLSK EEKFMLNSRN PDLAVATSKK WLPLHTLAAC GEFYLVDSLL KHNLDINATD VGGLTVLHRA
301: IIGKKQAITN YLLRESANPF VLDDEGATLM HYAVQTASAP TIKLLLLYNA DINAQDRDGW TPLHVAVQAR RSDIVKLLLI KGADIEVKNK DGLTPLGLCL
401: YLGREIRTYE VMKLLKEFPL SRHKKRLVTT DEDIE

Arabidopsis Description

AKRPAT5G66055 protein [Source:UniProtKB/TrEMBL;Acc:B9DF91]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.