Factsheet for Os03t0135600-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
nucleus 1
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU93284	Sorghum	plastid	72.56	73.56
Zm00001d027544_P001	Maize	plastid	70.98	72.62
TraesCS4D01G328600.1	Wheat	plastid	70.52	68.5
TraesCS5A01G503200.2	Wheat	plastid	71.43	66.88
TraesCS4B01G331800.1	Wheat	plastid	69.61	65.6
HORVU4Hr1G080940.1	Barley	plastid	71.43	65.49
Bra037188.1-P	Field mustard	mitochondrion	26.08	59.59
KRH76586	Soybean	extracellular	17.69	58.65
GSMUA_Achr4P29610_001	Banana	plastid	53.06	55.71
KRH16661	Soybean	cytosol, vacuole	5.44	54.55
KRH76587	Soybean	plastid	46.26	46.15
KRH28866	Soybean	plastid	45.8	45.5
Solyc02g061820.2.1	Tomato	plastid	44.22	43.05
PGSC0003DMT400022381	Potato	plastid	43.99	42.92
VIT_00s0264g00130.t01	Wine grape	cytosol, plastid	46.03	42.83
CDX81417	Canola	plastid	41.5	42.26
AT5G66055.1	Thale cress	plastid	41.04	41.61
CDY18585	Canola	plastid	39.46	40.85
KRH28867	Soybean	plastid	38.78	40.62

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.1	EntrezGene:4331537	ProteinID:ABF93849.1	ProteinID:ABF93850.1	EMBL:AK241598
InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	ProteinID:BAS82179.1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0009507
GO:GO:0009536	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	EnsemblPlantsGene:Os03g0135600	EnsemblPlants:Os03t0135600-01
PFAM:PF12796	PIRSF:PIRSF000654	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR45194	UniProt:Q10S45
SMART:SM00248	SUPFAM:SSF48403	UniParc:UPI0000DB40D3	RefSeq:XP_015633026.1	RefSeq:XP_015633027.1	RefSeq:XP_015633029.1
RefSeq:XP_015633030.1	RefSeq:XP_015633031.1	RefSeq:XP_015633032.1	RefSeq:XP_015633033.1	RefSeq:XP_015633034.1	RefSeq:XP_015633035.1
SEG:seg	:	:	:	:	:

Description

Similar to Ankyrin repeat protein. (Os03t0135600-01)

Coordinates

chr3:-:1970948..1979567

Molecular Weight (calculated)

49227.7 Da

IEP (calculated)

7.849

GRAVY (calculated)

-0.484

Length

441 amino acids

Sequence
(BLAST)

001: MPPSLSLHHH LLLFPFPSHV QTLNPLSASP RLHPHSKSLL PRRRPLVTSP SSFAVAAVDE FDEDFAIGDC VVFEDDAFEE PDVDLPSPAP STTSRPRRKP
101: AAEAGGGGGS SLVPERWRDA AEEINLTKKE KRRIAHGLRF GSRLERRAPP AVAAPDEYRA YREGRLDAEL GRVARDYAEP IERSPVPDRV EAPPPPEPGA
201: RVAPRNPRLG LGVRSLDDIT ELFNSTEYVP GEMEDGNNPK SRRKLFTDEE KVLLNKRVPD LEAATSSKWL PLHTIAASGD FYLLDNLLKH NINVNALDKD
301: GLPAIHKAIL SKKHAIINYL LRNSANPFIH DKDGATLMHY AVQTACSQTI KTLLLYNVDI NRPDDYGWTP LHLAVQTQRT DIVKLLLIKG ADRTLKTQDG
401: FTPLELCLRL GHHARTYELI KLLKSFRLPK QHDPVQHLDG I

Best Arabidopsis Sequence Match ( AT5G66055.1 )
(BLAST)

001: MQSLSTPHTI SLLLPRTSPS RLSPSLHSLA FPTRLRSLSY SSQTSILPDA GDDFIVGDCL VYEDGVFEDP YLDKEVTQVA KQERKKNRRG GAKRLDESEI
101: EPENLVPEEW RDIQAEVNLT KKDKRKIAQE MEFGVRVEKK RQGLIPLRKV DLNDFLTYKE AKLAQLRPVI LDKPGNFSDD SGASSDGETA VSSPSERVAP
201: KNPRWAVYGK GFDHVAKFFN SDKYDPSDKK SDGPRKLLSK EEKFMLNSRN PDLAVATSKK WLPLHTLAAC GEFYLVDSLL KHNLDINATD VGGLTVLHRA
301: IIGKKQAITN YLLRESANPF VLDDEGATLM HYAVQTASAP TIKLLLLYNA DINAQDRDGW TPLHVAVQAR RSDIVKLLLI KGADIEVKNK DGLTPLGLCL
401: YLGREIRTYE VMKLLKEFPL SRHKKRLVTT DEDIE

Arabidopsis Description

AKRPAT5G66055 protein [Source:UniProtKB/TrEMBL;Acc:B9DF91]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.