CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDY44587
CDY44589
CDY53114

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G66055.1	CDY44587	AT5G40160.1	17092312
AT5G66055.1	CDY44589	AT5G40160.1	17092312
AT5G66055.1	CDY53114	AT5G40160.1	17092312

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra037188.1-P	Field mustard	mitochondrion	43.19	95.34
AT5G66055.1	Thale cress	plastid	80.28	78.62
CDX81417	Canola	plastid	75.59	74.36
KRH76586	Soybean	extracellular	19.01	60.9
KRH16661	Soybean	cytosol, vacuole	6.1	59.09
KRH76587	Soybean	plastid	55.63	53.62
KRH28866	Soybean	plastid	55.63	53.38
VIT_00s0264g00130.t01	Wine grape	cytosol, plastid	54.69	49.16
Solyc02g061820.2.1	Tomato	plastid	49.3	46.36
PGSC0003DMT400022381	Potato	plastid	48.83	46.02
KRH28867	Soybean	plastid	43.9	44.42
GSMUA_Achr4P29610_001	Banana	plastid	42.96	43.57
CDY44589	Canola	cytosol, endoplasmic reticulum, vacuole	12.44	42.06
Zm00001d027544_P001	Maize	plastid	42.25	41.76
OQU93284	Sorghum	plastid	42.49	41.61
Os03t0135600-01	Rice	plastid	40.85	39.46
TraesCS4D01G328600.1	Wheat	plastid	40.61	38.11
TraesCS4B01G331800.1	Wheat	plastid	40.85	37.18
TraesCS5A01G503200.2	Wheat	plastid	40.85	36.94
HORVU4Hr1G080940.1	Barley	plastid	41.08	36.38
CDY53114	Canola	cytosol, plastid	22.54	30.28
CDY44587	Canola	plastid	22.07	29.56

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.1	UniProt:A0A078FW07	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
EnsemblPlants:CDY18585	ProteinID:CDY18585	ProteinID:CDY18585.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
EnsemblPlantsGene:GSBRNA2T00005638001	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	PFAM:PF12796	PFAM:PF13637
PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR45194	SMART:SM00248	SUPFAM:SSF48403	UniParc:UPI0004EED9EE
SEG:seg	:	:	:	:	:

Description

BnaA09g08100DBnaA09g08100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FW07]

Coordinates

chrLK032087:-:80732..82674

Molecular Weight (calculated)

47717.6 Da

IEP (calculated)

9.081

GRAVY (calculated)

-0.363

Length

426 amino acids

Sequence
(BLAST)

001: MQLATTISLL LPSPSPSRLS PSLHSLIIPK RLCSVSYSSQ TSILPDAADD FTVGDCLVYE DGVFEDPYLE EEVSIIPKKR GRGKRIVESA AEIEPENLVP
101: DEWRDVQAEV NLTKKDKRKI AQELEFGVKV EKKRQGLIPL RKVDLKEYLT YKEAKVNQLK PVVLDKPTTF DGDGGEKGEE TFSSERVAPK NPRWAVYGKG
201: FEHVTKFFNS DKYDPNGKKL DGPRKLLSKE EKFMLNSRNP HIAVATSKKW LPLHTLAASG EFYLVDSLLK HNLDINATDV GGLTALHRAI IGKKQAITNY
301: LLRESANPFV LDDEGATLMH YAVQTASAPT IKLLLLYNAD INAQDRDGWT PLHVAVQARR SDIVKLLLIK GADIQVKNKA SSITFPLDGL TPLGLCLYLG
401: RETRTYEVLK MLKEFPHSRL KRLVTD

Best Arabidopsis Sequence Match ( AT5G66055.1 )
(BLAST)

001: MQSLSTPHTI SLLLPRTSPS RLSPSLHSLA FPTRLRSLSY SSQTSILPDA GDDFIVGDCL VYEDGVFEDP YLDKEVTQVA KQERKKNRRG GAKRLDESEI
101: EPENLVPEEW RDIQAEVNLT KKDKRKIAQE MEFGVRVEKK RQGLIPLRKV DLNDFLTYKE AKLAQLRPVI LDKPGNFSDD SGASSDGETA VSSPSERVAP
201: KNPRWAVYGK GFDHVAKFFN SDKYDPSDKK SDGPRKLLSK EEKFMLNSRN PDLAVATSKK WLPLHTLAAC GEFYLVDSLL KHNLDINATD VGGLTVLHRA
301: IIGKKQAITN YLLRESANPF VLDDEGATLM HYAVQTASAP TIKLLLLYNA DINAQDRDGW TPLHVAVQAR RSDIVKLLLI KGADIEVKNK DGLTPLGLCL
401: YLGREIRTYE VMKLLKEFPL SRHKKRLVTT DEDIE

Arabidopsis Description

AKRPAT5G66055 protein [Source:UniProtKB/TrEMBL;Acc:B9DF91]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.