Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029260.1-P | Field mustard | nucleus | 78.22 | 82.29 |
| CDY67519 | Canola | nucleus | 78.71 | 81.54 |
| PGSC0003DMT400050280 | Potato | nucleus | 55.45 | 54.63 |
| Solyc03g116020.2.1 | Tomato | nucleus | 54.95 | 53.88 |
| KRH56910 | Soybean | cytosol | 52.97 | 51.94 |
| KRH03479 | Soybean | cytosol | 50.49 | 49.04 |
| VIT_17s0000g06240.t01 | Wine grape | nucleus | 56.44 | 48.51 |
| GSMUA_Achr8P16910_001 | Banana | cytosol | 47.52 | 47.76 |
| PGSC0003DMT400083079 | Potato | cytosol | 52.97 | 47.35 |
| GSMUA_Achr5P23750_001 | Banana | cytosol | 51.98 | 46.46 |
| TraesCS4A01G002200.1 | Wheat | nucleus | 51.49 | 45.81 |
| Os03t0187000-01 | Rice | nucleus | 52.48 | 45.69 |
| GSMUA_Achr6P03330_001 | Banana | cytosol | 50.49 | 45.13 |
| HORVU4Hr1G078020.1 | Barley | nucleus | 50.49 | 44.74 |
| Solyc06g069770.2.1 | Tomato | cytosol, plastid | 50.0 | 44.49 |
| KRH54559 | Soybean | cytosol | 55.45 | 44.44 |
| TraesCS4B01G302900.1 | Wheat | nucleus | 50.0 | 44.3 |
| TraesCS4D01G301400.1 | Wheat | nucleus | 49.01 | 43.23 |
| Zm00001d048238_P001 | Maize | extracellular | 50.0 | 42.98 |
| EER95366 | Sorghum | nucleus | 48.51 | 40.0 |
| KRH63336 | Soybean | cytosol, endoplasmic reticulum, nucleus | 50.99 | 39.62 |
| Zm00001d027967_P001 | Maize | nucleus | 45.05 | 34.87 |
Protein Annotations
| Gene3D:3.10.450.40 | MapMan:35.1 | EntrezGene:836365 | UniProt:A0A178UL88 | ProteinID:AED97608.1 | EMBL:AF371327 |
| EMBL:AK175305 | EMBL:AK229718 | ArrayExpress:AT5G62440 | EnsemblPlantsGene:AT5G62440 | RefSeq:AT5G62440 | TAIR:AT5G62440 |
| RefSeq:AT5G62440-TAIR-G | EnsemblPlants:AT5G62440.1 | TAIR:AT5G62440.1 | EMBL:AY087852 | ProteinID:BAB11494.1 | ProteinID:BAB11495.1 |
| EMBL:BT008568 | EMBL:BT008688 | GO:GO:0000003 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009790 | GO:GO:0009791 | GO:GO:0009793 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0017126 | GO:GO:0051302 | RefSeq:NP_201050.2 | ProteinID:OAO93451.1 |
| PFAM:PF11523 | PO:PO:0000005 | PO:PO:0000009 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007006 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR33415 | PANTHER:PTHR33415:SF3 |
| UniProt:Q8L557 | UniParc:UPI00000A4ECA | SEG:seg | : | : | : |
Description
EMB514Protein EMBRYO DEFECTIVE 514 [Source:UniProtKB/Swiss-Prot;Acc:Q8L557]
Coordinates
chr5:-:25072117..25074069
Molecular Weight (calculated)
22546.5 Da
IEP (calculated)
5.742
GRAVY (calculated)
-0.943
Length
202 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEQEIVDS LSAEVNPDQK VDMEVETATP KAETGDEKRE REETEEEENG GESKKQKVGE EEKSGPVKLG PKEFVTSVAM FDYFVKFLHF WPTDLDVNKY
101: EHMVLLDLIK KGHSEPEKKI GGGIKTFQVR THPMWKSRCF FLVREDDTAD DFSFRKCVDQ ILPLPENMKT PGANGNGHGG GRGGGGGRRG GRGGGRGGRF
201: RR
101: EHMVLLDLIK KGHSEPEKKI GGGIKTFQVR THPMWKSRCF FLVREDDTAD DFSFRKCVDQ ILPLPENMKT PGANGNGHGG GRGGGGGRRG GRGGGRGGRF
201: RR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.