Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P03330_001 | Banana | cytosol | 69.03 | 69.03 |
| CDX87249 | Canola | cytosol | 16.81 | 59.38 |
| Bra029260.1-P | Field mustard | nucleus | 48.23 | 56.77 |
| Bra035894.1-P | Field mustard | cytosol | 15.49 | 56.45 |
| CDY16774 | Canola | cytosol | 15.49 | 56.45 |
| CDY67519 | Canola | nucleus | 48.67 | 56.41 |
| GSMUA_Achr8P16910_001 | Banana | cytosol | 47.79 | 53.73 |
| AT5G62440.1 | Thale cress | nucleus | 46.46 | 51.98 |
| Bra010083.1-P | Field mustard | nucleus | 46.46 | 51.72 |
| CDY00287 | Canola | nucleus | 46.46 | 51.72 |
| CDY65200 | Canola | nucleus | 46.02 | 51.23 |
| VIT_17s0000g06240.t01 | Wine grape | nucleus | 50.44 | 48.51 |
| KRH56910 | Soybean | cytosol | 43.36 | 47.57 |
| PGSC0003DMT400083079 | Potato | cytosol | 46.46 | 46.46 |
| Solyc03g116020.2.1 | Tomato | nucleus | 42.04 | 46.12 |
| PGSC0003DMT400050280 | Potato | nucleus | 41.59 | 45.85 |
| TraesCS4A01G002200.1 | Wheat | nucleus | 46.02 | 45.81 |
| Os03t0187000-01 | Rice | nucleus | 46.02 | 44.83 |
| KRH03479 | Soybean | cytosol | 41.15 | 44.71 |
| Solyc06g069770.2.1 | Tomato | cytosol, plastid | 44.69 | 44.49 |
| TraesCS4B01G302900.1 | Wheat | nucleus | 44.25 | 43.86 |
| TraesCS4D01G301400.1 | Wheat | nucleus | 44.25 | 43.67 |
| HORVU4Hr1G078020.1 | Barley | nucleus | 42.92 | 42.54 |
| Zm00001d048238_P001 | Maize | extracellular | 43.81 | 42.13 |
| EER95366 | Sorghum | nucleus | 42.92 | 39.59 |
| KRH54559 | Soybean | cytosol | 43.36 | 38.89 |
| KRH63336 | Soybean | cytosol, endoplasmic reticulum, nucleus | 41.15 | 35.77 |
| Zm00001d027967_P001 | Maize | nucleus | 41.15 | 35.63 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P23750_001 | EnsemblPlants:GSMUA_Achr5T23750_001 | EnsemblPlantsGene:GSMUA_Achr5G23750_001 | Gene3D:3.10.450.40 | PANTHER:PTHR33415 | PANTHER:PTHR33415:SF3 |
| PFAM:PF11523 | SEG:seg | UniParc:UPI000296A575 | UniProt:M0T150 | MapMan:35.1 | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G23750_001]
Coordinates
chr5:-:25373599..25376512
Molecular Weight (calculated)
25215.6 Da
IEP (calculated)
5.718
GRAVY (calculated)
-0.831
Length
226 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEDLADNPQ LFEGDELMAE AVPAESGGSA EKRRREEAGE EDSVSKRQKP EGCLEEEGTD GVEGEEEVGG DVEVRRSRDG GESEVASIGP KVFTSSVEMF
101: DYFLKLLRSW LPNLNINKYE HMVLLDLLKK GHPEPAKKIG EGIEAFQVRY HPTYKSRCFF LIRVDGTTDD FSFRKCVDKI LPLPDHLKVQ STSDNDRVLG
201: NKHGSHQRGG GRRGGRGYGK RGGFRK
101: DYFLKLLRSW LPNLNINKYE HMVLLDLLKK GHPEPAKKIG EGIEAFQVRY HPTYKSRCFF LIRVDGTTDD FSFRKCVDKI LPLPDHLKVQ STSDNDRVLG
201: NKHGSHQRGG GRRGGRGYGK RGGFRK
001: MAEEQEIVDS LSAEVNPDQK VDMEVETATP KAETGDEKRE REETEEEENG GESKKQKVGE EEKSGPVKLG PKEFVTSVAM FDYFVKFLHF WPTDLDVNKY
101: EHMVLLDLIK KGHSEPEKKI GGGIKTFQVR THPMWKSRCF FLVREDDTAD DFSFRKCVDQ ILPLPENMKT PGANGNGHGG GRGGGGGRRG GRGGGRGGRF
201: RR
101: EHMVLLDLIK KGHSEPEKKI GGGIKTFQVR THPMWKSRCF FLVREDDTAD DFSFRKCVDQ ILPLPENMKT PGANGNGHGG GRGGGGGRRG GRGGGRGGRF
201: RR
Arabidopsis Description
EMB514Protein EMBRYO DEFECTIVE 514 [Source:UniProtKB/Swiss-Prot;Acc:Q8L557]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.