Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY16774 | Canola | cytosol | 75.0 | 77.42 |
| CDY67519 | Canola | nucleus | 84.38 | 27.69 |
| CDY65200 | Canola | nucleus | 82.81 | 26.11 |
| CDY00287 | Canola | nucleus | 82.81 | 26.11 |
| GSMUA_Achr8P16910_001 | Banana | cytosol | 64.06 | 20.4 |
| PGSC0003DMT400050280 | Potato | nucleus | 59.38 | 18.54 |
| Solyc03g116020.2.1 | Tomato | nucleus | 59.38 | 18.45 |
| KRH56910 | Soybean | cytosol | 59.38 | 18.45 |
| VIT_17s0000g06240.t01 | Wine grape | nucleus | 65.62 | 17.87 |
| KRH03479 | Soybean | cytosol | 57.81 | 17.79 |
| TraesCS4B01G302900.1 | Wheat | nucleus | 62.5 | 17.54 |
| KRH54559 | Soybean | cytosol | 67.19 | 17.06 |
| TraesCS4D01G301400.1 | Wheat | nucleus | 60.94 | 17.03 |
| GSMUA_Achr5P23750_001 | Banana | cytosol | 59.38 | 16.81 |
| Os03t0187000-01 | Rice | nucleus | 60.94 | 16.81 |
| TraesCS4A01G002200.1 | Wheat | nucleus | 59.38 | 16.74 |
| HORVU4Hr1G078020.1 | Barley | nucleus | 59.38 | 16.67 |
| Zm00001d048238_P001 | Maize | extracellular | 60.94 | 16.6 |
| PGSC0003DMT400083079 | Potato | cytosol | 57.81 | 16.37 |
| EER95366 | Sorghum | nucleus | 60.94 | 15.92 |
| Solyc06g069770.2.1 | Tomato | cytosol, plastid | 56.25 | 15.86 |
| GSMUA_Achr6P03330_001 | Banana | cytosol | 51.56 | 14.6 |
| Zm00001d027967_P001 | Maize | nucleus | 57.81 | 14.18 |
| KRH63336 | Soybean | cytosol, endoplasmic reticulum, nucleus | 56.25 | 13.85 |
Protein Annotations
| EnsemblPlants:CDX87249 | EnsemblPlantsGene:GSBRNA2T00146189001 | Gene3D:3.10.450.40 | PANTHER:PTHR33415 | PANTHER:PTHR33415:SF3 | PFAM:PF11523 |
| ProteinID:CDX87249 | ProteinID:CDX87249.1 | SEG:seg | UniParc:UPI0004EDDC0F | MapMan:35.1 | : |
Description
BnaC09g05640D
Coordinates
chrLK031849:-:1404290..1404484
Molecular Weight (calculated)
7247.6 Da
IEP (calculated)
10.321
GRAVY (calculated)
-0.961
Length
64 amino acids
Sequence
(BLAST)
(BLAST)
1: MWKSRCFFLV REDDSADDFS YRKCVDHILP LPENMKTPGY NGNGHGGRGR RVGRGGCRGG GFRR
001: MAEEQEIVDS LSAEVNPDQK VDMEVETATP KAETGDEKRE REETEEEENG GESKKQKVGE EEKSGPVKLG PKEFVTSVAM FDYFVKFLHF WPTDLDVNKY
101: EHMVLLDLIK KGHSEPEKKI GGGIKTFQVR THPMWKSRCF FLVREDDTAD DFSFRKCVDQ ILPLPENMKT PGANGNGHGG GRGGGGGRRG GRGGGRGGRF
201: RR
101: EHMVLLDLIK KGHSEPEKKI GGGIKTFQVR THPMWKSRCF FLVREDDTAD DFSFRKCVDQ ILPLPENMKT PGANGNGHGG GRGGGGGRRG GRGGGRGGRF
201: RR
Arabidopsis Description
EMB514Protein EMBRYO DEFECTIVE 514 [Source:UniProtKB/Swiss-Prot;Acc:Q8L557]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.