Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY00287 | Canola | nucleus | 96.06 | 96.06 |
| CDX87249 | Canola | cytosol | 26.11 | 82.81 |
| CDY67519 | Canola | nucleus | 77.83 | 81.03 |
| CDY16774 | Canola | cytosol | 24.63 | 80.65 |
| KRH56910 | Soybean | cytosol | 53.2 | 52.43 |
| PGSC0003DMT400050280 | Potato | nucleus | 52.71 | 52.2 |
| VIT_17s0000g06240.t01 | Wine grape | nucleus | 59.61 | 51.49 |
| Solyc03g116020.2.1 | Tomato | nucleus | 52.22 | 51.46 |
| GSMUA_Achr8P16910_001 | Banana | cytosol | 48.28 | 48.76 |
| KRH03479 | Soybean | cytosol | 48.28 | 47.12 |
| Solyc06g069770.2.1 | Tomato | cytosol, plastid | 52.22 | 46.7 |
| PGSC0003DMT400083079 | Potato | cytosol | 51.72 | 46.46 |
| GSMUA_Achr5P23750_001 | Banana | cytosol | 51.23 | 46.02 |
| KRH54559 | Soybean | cytosol | 56.65 | 45.63 |
| Zm00001d048238_P001 | Maize | extracellular | 51.72 | 44.68 |
| TraesCS4A01G002200.1 | Wheat | nucleus | 49.75 | 44.49 |
| Os03t0187000-01 | Rice | nucleus | 50.25 | 43.97 |
| HORVU4Hr1G078020.1 | Barley | nucleus | 48.77 | 43.42 |
| GSMUA_Achr6P03330_001 | Banana | cytosol | 48.28 | 43.36 |
| TraesCS4B01G302900.1 | Wheat | nucleus | 48.28 | 42.98 |
| TraesCS4D01G301400.1 | Wheat | nucleus | 47.78 | 42.36 |
| EER95366 | Sorghum | nucleus | 49.75 | 41.22 |
| KRH63336 | Soybean | cytosol, endoplasmic reticulum, nucleus | 50.74 | 39.62 |
| Zm00001d027967_P001 | Maize | nucleus | 47.78 | 37.16 |
Protein Annotations
| EnsemblPlants:CDY65200 | EnsemblPlantsGene:GSBRNA2T00045372001 | Gene3D:3.10.450.40 | PANTHER:PTHR33415 | PANTHER:PTHR33415:SF3 | PFAM:PF11523 |
| ProteinID:CDY65200 | ProteinID:CDY65200.1 | SEG:seg | UniParc:UPI0004EC4C35 | UniProt:A0A078JFG1 | MapMan:35.1 |
Description
BnaCnng45980DBnaCnng45980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JFG1]
Coordinates
chrLK034689:-:1607..2825
Molecular Weight (calculated)
22279.3 Da
IEP (calculated)
8.229
GRAVY (calculated)
-0.872
Length
203 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEQQEIVNT VSAEANPDPK AVMEVEAAAP KADETSDKRG REQTEETEDG GETKKQKVGE EEKSNGPVKL GPKEFVSSVA MFDYFTKFMH FWPTGLDVNK
101: YEQMVLLDLI KKGHSEPDKK IGGGIKAFQV RTHPMWKSRC FFLVREDDSA DDFSFRKCVD QILPLPENMK APGSTGNGHG GGGRGGGGRR GGRGGGRGGR
201: FRR
101: YEQMVLLDLI KKGHSEPDKK IGGGIKAFQV RTHPMWKSRC FFLVREDDSA DDFSFRKCVD QILPLPENMK APGSTGNGHG GGGRGGGGRR GGRGGGRGGR
201: FRR
001: MAEEQEIVDS LSAEVNPDQK VDMEVETATP KAETGDEKRE REETEEEENG GESKKQKVGE EEKSGPVKLG PKEFVTSVAM FDYFVKFLHF WPTDLDVNKY
101: EHMVLLDLIK KGHSEPEKKI GGGIKTFQVR THPMWKSRCF FLVREDDTAD DFSFRKCVDQ ILPLPENMKT PGANGNGHGG GRGGGGGRRG GRGGGRGGRF
201: RR
101: EHMVLLDLIK KGHSEPEKKI GGGIKTFQVR THPMWKSRCF FLVREDDTAD DFSFRKCVDQ ILPLPENMKT PGANGNGHGG GRGGGGGRRG GRGGGRGGRF
201: RR
Arabidopsis Description
EMB514Protein EMBRYO DEFECTIVE 514 [Source:UniProtKB/Swiss-Prot;Acc:Q8L557]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.