CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0187000-01	Rice	nucleus	60.41	63.79
Zm00001d027967_P001	Maize	nucleus	66.94	62.84
TraesCS4B01G302900.1	Wheat	nucleus	58.37	62.72
TraesCS4A01G002200.1	Wheat	nucleus	57.96	62.56
HORVU4Hr1G078020.1	Barley	nucleus	57.55	61.84
Bra035894.1-P	Field mustard	cytosol	15.51	61.29
CDY16774	Canola	cytosol	15.51	61.29
TraesCS4D01G301400.1	Wheat	nucleus	57.14	61.14
CDX87249	Canola	cytosol	15.92	60.94
CDY65200	Canola	nucleus	41.22	49.75
Bra010083.1-P	Field mustard	nucleus	40.82	49.26
CDY00287	Canola	nucleus	40.82	49.26
CDY67519	Canola	nucleus	39.18	49.23
Bra029260.1-P	Field mustard	nucleus	38.37	48.96
AT5G62440.1	Thale cress	nucleus	40.0	48.51
GSMUA_Achr8P16910_001	Banana	cytosol	37.96	46.27
PGSC0003DMT400083079	Potato	cytosol	41.22	44.69
Solyc06g069770.2.1	Tomato	cytosol, plastid	40.82	44.05
PGSC0003DMT400050280	Potato	nucleus	36.73	43.9
VIT_17s0000g06240.t01	Wine grape	nucleus	41.63	43.4
GSMUA_Achr5P23750_001	Banana	cytosol	39.59	42.92
Solyc03g116020.2.1	Tomato	nucleus	35.92	42.72
KRH56910	Soybean	cytosol	34.29	40.78
GSMUA_Achr6P03330_001	Banana	cytosol	37.55	40.71
KRH54559	Soybean	cytosol	40.82	39.68
KRH03479	Soybean	cytosol	33.06	38.94
KRH63336	Soybean	cytosol, endoplasmic reticulum, nucleus	35.92	33.85

Protein Annotations

Gene3D:3.10.450.40	MapMan:35.1	EntrezGene:8057645	UniProt:C5WUV9	ncoils:Coil	EnsemblPlants:EER95366
ProteinID:EER95366	ProteinID:EER95366.1	GO:GO:0000003	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0007275	GO:GO:0008150	GO:GO:0009790	GO:GO:0009791	GO:GO:0009793
GO:GO:0009987	GO:GO:0016043	GO:GO:0017126	GO:GO:0051302	PFAM:PF11523	PANTHER:PTHR33415
PANTHER:PTHR33415:SF3	EnsemblPlantsGene:SORBI_3001G477900	unigene:Sbi.16814	UniParc:UPI0001A82E16	RefSeq:XP_002468368.1	SEG:seg

Description

hypothetical protein

Coordinates

chr1:-:75028083..75030706

Molecular Weight (calculated)

26040.0 Da

IEP (calculated)

4.675

GRAVY (calculated)

-0.897

Length

245 amino acids

Sequence
(BLAST)

001: MAEPEVEVAA ATEMETEAPA AAGQKREREE GGDPAADGGE AAAEEAAAAK KPKVEEEAKE AEEAEEGKAE EVEEGKAEET EGKTEEANEE KAVEADGKPV
101: KLGPKEFASA VEMFDYFFAL LHSWTPQLEF NKYEQLVLED LLKKGHADPA KKIGAGVEAF EIRNHPVWQS RCFFVRRTDG SADDFSFRKC VDNILPLPED
201: MKIGNGKKSG GHHKGGGGGG QGGGGRGGGG RGGWRGGRGR GRRGG

Best Arabidopsis Sequence Match ( AT5G62440.1 )
(BLAST)

001: MAEEQEIVDS LSAEVNPDQK VDMEVETATP KAETGDEKRE REETEEEENG GESKKQKVGE EEKSGPVKLG PKEFVTSVAM FDYFVKFLHF WPTDLDVNKY
101: EHMVLLDLIK KGHSEPEKKI GGGIKTFQVR THPMWKSRCF FLVREDDTAD DFSFRKCVDQ ILPLPENMKT PGANGNGHGG GRGGGGGRRG GRGGGRGGRF
201: RR

Arabidopsis Description

EMB514Protein EMBRYO DEFECTIVE 514 [Source:UniProtKB/Swiss-Prot;Acc:Q8L557]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.