Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74860 | Canola | nucleus | 92.64 | 95.42 |
| AT5G25070.1 | Thale cress | cytosol | 76.94 | 75.27 |
| KRH66324 | Soybean | cytosol | 19.86 | 45.4 |
| VIT_18s0122g00110.t01 | Wine grape | nucleus | 47.22 | 43.42 |
| KRH77981 | Soybean | nucleus | 43.06 | 42.35 |
| PGSC0003DMT400065934 | Potato | nucleus | 42.78 | 39.59 |
| GSMUA_Achr1P27870_001 | Banana | nucleus | 38.06 | 35.72 |
| EES14249 | Sorghum | nucleus | 37.5 | 34.44 |
| Zm00001d049744_P001 | Maize | nucleus | 36.81 | 34.19 |
| TraesCS7B01G141000.1 | Wheat | nucleus | 36.53 | 33.21 |
| HORVU7Hr1G051520.12 | Barley | cytosol, mitochondrion, nucleus, plastid | 30.56 | 33.08 |
| GSMUA_Achr9P20030_001 | Banana | nucleus | 36.53 | 33.04 |
| TraesCS7A01G250200.1 | Wheat | nucleus | 36.39 | 32.83 |
| TraesCS7D01G248900.1 | Wheat | nucleus | 35.83 | 32.45 |
| Zm00001d031489_P002 | Maize | nucleus | 35.42 | 31.52 |
Protein Annotations
| EnsemblPlants:Bra005056.1 | EnsemblPlants:Bra005056.1-P | EnsemblPlantsGene:Bra005056 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005829 | ncoils:Coil | PANTHER:PTHR38394 | SEG:seg | UniParc:UPI00025474DD |
| UniProt:M4CLG9 | MapMan:35.2 | : | : | : | : |
Description
AT5G25070 (E=2e-220) | unknown protein
Coordinates
chrA05:+:3202051..3204771
Molecular Weight (calculated)
80253.7 Da
IEP (calculated)
4.267
GRAVY (calculated)
-0.640
Length
720 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGGDDMDSL FEGMELFTPS SSQLSDNSPA ILPPSKEAET TVITAPAAEA TEAMSEPLDE DMFSDLTIVT PVQHVPEAVT HQSPLPSSSS SSSSMRRQVS
101: RRKKRSGGLR IGYGRHEVND DEDDDSVSQQ SADSVSQLSD SVNQVTDSVS QLSDSVNQIT DSVNQEPDVP VVDQPLDSVK AQIEGKLKLA RALAASVTSS
201: RKNAIRKRRQ ASENLRLASK AHDELEKQLE EAIEAEDFDA AEKISESLAD AERDKLSLMA LLRQAESDCD AIESKMEEVL LSQIAAEEES ASLLRGFCTD
301: AESEAESILE KADAFCVEET GKWNSCCEDV EFRKVELDIE SVIVDNVRLS LNDTLEGSVE QEMKEKEMLG KKKEHLSNEL EELLALVKAK EKEIDENDSQ
401: IKAVEERINS VVSGYKELQA SMDKMFSDLQ AGLSQVDTET EDLSRKKKDV DEFVASEKER GAKLRELVSV SADEANEYEE VIKLRKTLMS YVSKTREERA
501: KLVSIEEKLS EEVQRLQEEV SSTRESLKEQ SSRKSIIQQN ITSFMDKIMF IEKRMPELEA EKKVAASTRN FKEAGRIAAE LKSLNLEKDK IQTETGQANT
601: ELEKAEEEIE ETIKRLQELE RLILSKEKEL SVSRFQRLRI DSGTAKAERS AALELSDLEE ANLLLEEAQE AESEAEKLKL TCGIKEEEEE AKPCECFVSM
701: ELIATFGLKK LQELAESVPS
101: RRKKRSGGLR IGYGRHEVND DEDDDSVSQQ SADSVSQLSD SVNQVTDSVS QLSDSVNQIT DSVNQEPDVP VVDQPLDSVK AQIEGKLKLA RALAASVTSS
201: RKNAIRKRRQ ASENLRLASK AHDELEKQLE EAIEAEDFDA AEKISESLAD AERDKLSLMA LLRQAESDCD AIESKMEEVL LSQIAAEEES ASLLRGFCTD
301: AESEAESILE KADAFCVEET GKWNSCCEDV EFRKVELDIE SVIVDNVRLS LNDTLEGSVE QEMKEKEMLG KKKEHLSNEL EELLALVKAK EKEIDENDSQ
401: IKAVEERINS VVSGYKELQA SMDKMFSDLQ AGLSQVDTET EDLSRKKKDV DEFVASEKER GAKLRELVSV SADEANEYEE VIKLRKTLMS YVSKTREERA
501: KLVSIEEKLS EEVQRLQEEV SSTRESLKEQ SSRKSIIQQN ITSFMDKIMF IEKRMPELEA EKKVAASTRN FKEAGRIAAE LKSLNLEKDK IQTETGQANT
601: ELEKAEEEIE ETIKRLQELE RLILSKEKEL SVSRFQRLRI DSGTAKAERS AALELSDLEE ANLLLEEAQE AESEAEKLKL TCGIKEEEEE AKPCECFVSM
701: ELIATFGLKK LQELAESVPS
001: MDGGDDMDSL FEGMELFTPA SQFSGDSKVS SPPQSEETKA AEATLITAPS QPDVTEATLI TATSQPDITE ALDENLFSDL TIVTPVQHQP EPMEAVITTH
101: QSPAKNYGRQ VSRRKKRAAG LRIGYGRHET NNLDEDEDDA VSQQSDSVSQ VSDSVSQISD SVAQVFDSGN QSLDSPVVTV VVGNGSSRLE LVKAQIEAKL
201: NRSRDLAASV TSARKNAIRK KRQASENLRL ASTTHEELEK QLEEAIETED FDAAERISES LAAKERDRLA LLALLRQAES DCDAIESKME EVLLSQIAAE
301: EESACLLRSF GTDAENDAGS ILEKAEAFYS DEMEKWHSCS EDVEVRKVEL DIESVVVDNV RLSLNGILEG SVEQDMKEKE ILQKKKEHLA NELEELLALV
401: KAKEKEIDEN DSQIEAVEER INNVVTGFKE LQTSMDKMLN DVQAGLTEVD KETEDLSRKK KDVDEFMTSE KERGAKLRDL ARVSADEACE YEEVIKLRKG
501: LMSYVSKTRE ERAKLVNIEE KLSEEVQKLQ EEVSSTRELL KERSSKKSII QQNITSFMDK IMFIEKRMPE LEAEKKVAAS TRNFKEAGRI AAEAKSLNLE
601: KDKTQMETGK ANAELEKAEH EIEETIKRLQ EIEKLILSKE KELAISRFQR LRIDSGTAKA ERSAALELSD LEEANLLLEE AQEAESEAEK LKLTGGLKEE
701: EEEEEKAKSN EVFVSMELIA TVGLKKLQEL VESVPS
101: QSPAKNYGRQ VSRRKKRAAG LRIGYGRHET NNLDEDEDDA VSQQSDSVSQ VSDSVSQISD SVAQVFDSGN QSLDSPVVTV VVGNGSSRLE LVKAQIEAKL
201: NRSRDLAASV TSARKNAIRK KRQASENLRL ASTTHEELEK QLEEAIETED FDAAERISES LAAKERDRLA LLALLRQAES DCDAIESKME EVLLSQIAAE
301: EESACLLRSF GTDAENDAGS ILEKAEAFYS DEMEKWHSCS EDVEVRKVEL DIESVVVDNV RLSLNGILEG SVEQDMKEKE ILQKKKEHLA NELEELLALV
401: KAKEKEIDEN DSQIEAVEER INNVVTGFKE LQTSMDKMLN DVQAGLTEVD KETEDLSRKK KDVDEFMTSE KERGAKLRDL ARVSADEACE YEEVIKLRKG
501: LMSYVSKTRE ERAKLVNIEE KLSEEVQKLQ EEVSSTRELL KERSSKKSII QQNITSFMDK IMFIEKRMPE LEAEKKVAAS TRNFKEAGRI AAEAKSLNLE
601: KDKTQMETGK ANAELEKAEH EIEETIKRLQ EIEKLILSKE KELAISRFQR LRIDSGTAKA ERSAALELSD LEEANLLLEE AQEAESEAEK LKLTGGLKEE
701: EEEEEKAKSN EVFVSMELIA TVGLKKLQEL VESVPS
Arabidopsis Description
Neurofilament light protein [Source:UniProtKB/TrEMBL;Acc:Q8L4Q6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.