Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005056.1-P | Field mustard | nucleus | 95.42 | 92.64 |
| CDY44635 | Canola | nucleus | 91.85 | 88.43 |
| AT5G25070.1 | Thale cress | cytosol | 77.54 | 73.64 |
| KRH66324 | Soybean | cytosol | 20.31 | 45.08 |
| VIT_18s0122g00110.t01 | Wine grape | nucleus | 48.78 | 43.55 |
| KRH77981 | Soybean | nucleus | 43.78 | 41.8 |
| PGSC0003DMT400065934 | Potato | nucleus | 43.35 | 38.95 |
| GSMUA_Achr1P27870_001 | Banana | nucleus | 39.34 | 35.85 |
| EES14249 | Sorghum | nucleus | 38.05 | 33.93 |
| Zm00001d049744_P001 | Maize | nucleus | 37.48 | 33.81 |
| GSMUA_Achr9P20030_001 | Banana | nucleus | 37.34 | 32.79 |
| HORVU7Hr1G051520.12 | Barley | cytosol, mitochondrion, nucleus, plastid | 31.19 | 32.78 |
| TraesCS7B01G141000.1 | Wheat | nucleus | 36.77 | 32.45 |
| TraesCS7D01G248900.1 | Wheat | nucleus | 36.77 | 32.33 |
| TraesCS7A01G250200.1 | Wheat | nucleus | 36.77 | 32.21 |
| Zm00001d031489_P002 | Maize | nucleus | 35.62 | 30.78 |
Protein Annotations
| EnsemblPlants:CDX74860 | EnsemblPlantsGene:GSBRNA2T00116849001 | ncoils:Coil | PANTHER:PTHR38394 | ProteinID:CDX74860 | ProteinID:CDX74860.1 |
| SEG:seg | UniParc:UPI0004EE722A | MapMan:35.2 | : | : | : |
Description
BnaA05g06060D
Coordinates
chrLK031802:+:1070149..1073303
Molecular Weight (calculated)
78053.4 Da
IEP (calculated)
4.328
GRAVY (calculated)
-0.618
Length
699 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGGDDMDSL FEGMELFTPS SSLLSDSSPA ILPPSTVITA PAAEATETMS EPLDEDMFSD LTIVTPVQFV PEAVTHQSPL PSSSSSSSSM RRQVSRRKKR
101: SGGLRIGYGR HEVNDDEDDD SVSQQSADSV SQLSDSVNHV TDSVKPADSV VDQPLDSVKA QIEGKLKLAR ALAASVTSSR KNAIRKRRQA SENLRLASKA
201: HDELEKQLEE AIEAEDFDAA EKISESLADA ERDKLSLMAL LRQAESDCDA IESKMEEVLL SQIAAEEESA SLLRGFCTDA ENEAESILEK ADAFCIEETG
301: KWNSCCEDVE FRKVELDIES VIVDNVRLSL NDTLEGSVEQ EMKEKEMLRK KKEHLSEELE ELLALVKAKE KEIDENDSQI KAVEERINNA VSGYKELQAS
401: MDKMFSDLQA GLSQVDTETE ALSRKKKDVD EFVASEKERG AKLRELVSVS ADEANEYEEV IKLRKTLMSY VSKTREERAK LVSIEEKLSE EVQRLQEEVS
501: STRESLKEQS SRKSIIQQNI TSFMDKIMFI EKRMPELEAE KKVAASTRNF KEAGRIAAEL KSLNLEKDKI QTETGQANAE LERAEQEIEE TIKRLQELER
601: LILSKEKELS VSRFQRLRID SGTAKAERSA ALELSDLEEA NLLLEEAQEA ESEAEKLKLT CGIKEEEEEA KPCECFVSME LIATFGLKKL QELAESVPS
101: SGGLRIGYGR HEVNDDEDDD SVSQQSADSV SQLSDSVNHV TDSVKPADSV VDQPLDSVKA QIEGKLKLAR ALAASVTSSR KNAIRKRRQA SENLRLASKA
201: HDELEKQLEE AIEAEDFDAA EKISESLADA ERDKLSLMAL LRQAESDCDA IESKMEEVLL SQIAAEEESA SLLRGFCTDA ENEAESILEK ADAFCIEETG
301: KWNSCCEDVE FRKVELDIES VIVDNVRLSL NDTLEGSVEQ EMKEKEMLRK KKEHLSEELE ELLALVKAKE KEIDENDSQI KAVEERINNA VSGYKELQAS
401: MDKMFSDLQA GLSQVDTETE ALSRKKKDVD EFVASEKERG AKLRELVSVS ADEANEYEEV IKLRKTLMSY VSKTREERAK LVSIEEKLSE EVQRLQEEVS
501: STRESLKEQS SRKSIIQQNI TSFMDKIMFI EKRMPELEAE KKVAASTRNF KEAGRIAAEL KSLNLEKDKI QTETGQANAE LERAEQEIEE TIKRLQELER
601: LILSKEKELS VSRFQRLRID SGTAKAERSA ALELSDLEEA NLLLEEAQEA ESEAEKLKLT CGIKEEEEEA KPCECFVSME LIATFGLKKL QELAESVPS
001: MDGGDDMDSL FEGMELFTPA SQFSGDSKVS SPPQSEETKA AEATLITAPS QPDVTEATLI TATSQPDITE ALDENLFSDL TIVTPVQHQP EPMEAVITTH
101: QSPAKNYGRQ VSRRKKRAAG LRIGYGRHET NNLDEDEDDA VSQQSDSVSQ VSDSVSQISD SVAQVFDSGN QSLDSPVVTV VVGNGSSRLE LVKAQIEAKL
201: NRSRDLAASV TSARKNAIRK KRQASENLRL ASTTHEELEK QLEEAIETED FDAAERISES LAAKERDRLA LLALLRQAES DCDAIESKME EVLLSQIAAE
301: EESACLLRSF GTDAENDAGS ILEKAEAFYS DEMEKWHSCS EDVEVRKVEL DIESVVVDNV RLSLNGILEG SVEQDMKEKE ILQKKKEHLA NELEELLALV
401: KAKEKEIDEN DSQIEAVEER INNVVTGFKE LQTSMDKMLN DVQAGLTEVD KETEDLSRKK KDVDEFMTSE KERGAKLRDL ARVSADEACE YEEVIKLRKG
501: LMSYVSKTRE ERAKLVNIEE KLSEEVQKLQ EEVSSTRELL KERSSKKSII QQNITSFMDK IMFIEKRMPE LEAEKKVAAS TRNFKEAGRI AAEAKSLNLE
601: KDKTQMETGK ANAELEKAEH EIEETIKRLQ EIEKLILSKE KELAISRFQR LRIDSGTAKA ERSAALELSD LEEANLLLEE AQEAESEAEK LKLTGGLKEE
701: EEEEEKAKSN EVFVSMELIA TVGLKKLQEL VESVPS
101: QSPAKNYGRQ VSRRKKRAAG LRIGYGRHET NNLDEDEDDA VSQQSDSVSQ VSDSVSQISD SVAQVFDSGN QSLDSPVVTV VVGNGSSRLE LVKAQIEAKL
201: NRSRDLAASV TSARKNAIRK KRQASENLRL ASTTHEELEK QLEEAIETED FDAAERISES LAAKERDRLA LLALLRQAES DCDAIESKME EVLLSQIAAE
301: EESACLLRSF GTDAENDAGS ILEKAEAFYS DEMEKWHSCS EDVEVRKVEL DIESVVVDNV RLSLNGILEG SVEQDMKEKE ILQKKKEHLA NELEELLALV
401: KAKEKEIDEN DSQIEAVEER INNVVTGFKE LQTSMDKMLN DVQAGLTEVD KETEDLSRKK KDVDEFMTSE KERGAKLRDL ARVSADEACE YEEVIKLRKG
501: LMSYVSKTRE ERAKLVNIEE KLSEEVQKLQ EEVSSTRELL KERSSKKSII QQNITSFMDK IMFIEKRMPE LEAEKKVAAS TRNFKEAGRI AAEAKSLNLE
601: KDKTQMETGK ANAELEKAEH EIEETIKRLQ EIEKLILSKE KELAISRFQR LRIDSGTAKA ERSAALELSD LEEANLLLEE AQEAESEAEK LKLTGGLKEE
701: EEEEEKAKSN EVFVSMELIA TVGLKKLQEL VESVPS
Arabidopsis Description
Neurofilament light protein [Source:UniProtKB/TrEMBL;Acc:Q8L4Q6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.