Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH77981 | Soybean | nucleus | 76.83 | 33.06 |
| VIT_18s0122g00110.t01 | Wine grape | nucleus | 54.6 | 21.97 |
| CDX74860 | Canola | nucleus | 45.08 | 20.31 |
| Bra005056.1-P | Field mustard | nucleus | 45.4 | 19.86 |
| CDY44635 | Canola | nucleus | 45.08 | 19.56 |
| AT5G25070.1 | Thale cress | cytosol | 45.4 | 19.43 |
| HORVU7Hr1G051520.12 | Barley | cytosol, mitochondrion, nucleus, plastid | 39.37 | 18.65 |
| GSMUA_Achr1P27870_001 | Banana | nucleus | 44.44 | 18.25 |
| PGSC0003DMT400065934 | Potato | nucleus | 44.76 | 18.12 |
| Zm00001d031489_P002 | Maize | nucleus | 42.86 | 16.69 |
| EES14249 | Sorghum | nucleus | 41.27 | 16.58 |
| TraesCS7B01G141000.1 | Wheat | nucleus | 40.63 | 16.16 |
| TraesCS7D01G248900.1 | Wheat | nucleus | 40.63 | 16.1 |
| Zm00001d049744_P001 | Maize | nucleus | 39.37 | 16.0 |
| GSMUA_Achr9P20030_001 | Banana | nucleus | 40.32 | 15.95 |
| TraesCS7A01G250200.1 | Wheat | nucleus | 40.32 | 15.91 |
Protein Annotations
| EMBL:ACUP02001938 | EnsemblPlants:KRH66324 | EnsemblPlantsGene:GLYMA_03G099100 | PANTHER:PTHR38394 | ProteinID:KRH66324 | ProteinID:KRH66324.1 |
| SEG:seg | UniParc:UPI0006ED580E | UniProt:A0A0R0KR89 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr3:-:28717821..28719309
Molecular Weight (calculated)
36278.0 Da
IEP (calculated)
8.637
GRAVY (calculated)
-0.439
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MTHDQELFRE LDKSQVSKVR IDNVIEEQFT ILLDHCATNA LHNADSIMKR ASLVYSKEMG QWLSTPEALE VKKMELEIES QFINEARLEL NNVLMGELEQ
101: LLTLVKQKET KITNNDSNSE VVENKINKIV SGFKEMQSSI DVKYGKLQFV LAQFLILEEE MRARLREFAW IYTKEAKGYH KIVKLRRSLM SSILKSREGK
201: LTLAKNEEKL SGDVKLFQHE VSTARVSLQE LSSRKSSIQQ GITSFKQNII FIDKRVPELE AEKKDATAAR NFKEAARIAI EAKSPCVKKE SIQIDMDTTT
301: LNLELLREKL RLVNQ
101: LLTLVKQKET KITNNDSNSE VVENKINKIV SGFKEMQSSI DVKYGKLQFV LAQFLILEEE MRARLREFAW IYTKEAKGYH KIVKLRRSLM SSILKSREGK
201: LTLAKNEEKL SGDVKLFQHE VSTARVSLQE LSSRKSSIQQ GITSFKQNII FIDKRVPELE AEKKDATAAR NFKEAARIAI EAKSPCVKKE SIQIDMDTTT
301: LNLELLREKL RLVNQ
001: MDGGDDMDSL FEGMELFTPA SQFSGDSKVS SPPQSEETKA AEATLITAPS QPDVTEATLI TATSQPDITE ALDENLFSDL TIVTPVQHQP EPMEAVITTH
101: QSPAKNYGRQ VSRRKKRAAG LRIGYGRHET NNLDEDEDDA VSQQSDSVSQ VSDSVSQISD SVAQVFDSGN QSLDSPVVTV VVGNGSSRLE LVKAQIEAKL
201: NRSRDLAASV TSARKNAIRK KRQASENLRL ASTTHEELEK QLEEAIETED FDAAERISES LAAKERDRLA LLALLRQAES DCDAIESKME EVLLSQIAAE
301: EESACLLRSF GTDAENDAGS ILEKAEAFYS DEMEKWHSCS EDVEVRKVEL DIESVVVDNV RLSLNGILEG SVEQDMKEKE ILQKKKEHLA NELEELLALV
401: KAKEKEIDEN DSQIEAVEER INNVVTGFKE LQTSMDKMLN DVQAGLTEVD KETEDLSRKK KDVDEFMTSE KERGAKLRDL ARVSADEACE YEEVIKLRKG
501: LMSYVSKTRE ERAKLVNIEE KLSEEVQKLQ EEVSSTRELL KERSSKKSII QQNITSFMDK IMFIEKRMPE LEAEKKVAAS TRNFKEAGRI AAEAKSLNLE
601: KDKTQMETGK ANAELEKAEH EIEETIKRLQ EIEKLILSKE KELAISRFQR LRIDSGTAKA ERSAALELSD LEEANLLLEE AQEAESEAEK LKLTGGLKEE
701: EEEEEKAKSN EVFVSMELIA TVGLKKLQEL VESVPS
101: QSPAKNYGRQ VSRRKKRAAG LRIGYGRHET NNLDEDEDDA VSQQSDSVSQ VSDSVSQISD SVAQVFDSGN QSLDSPVVTV VVGNGSSRLE LVKAQIEAKL
201: NRSRDLAASV TSARKNAIRK KRQASENLRL ASTTHEELEK QLEEAIETED FDAAERISES LAAKERDRLA LLALLRQAES DCDAIESKME EVLLSQIAAE
301: EESACLLRSF GTDAENDAGS ILEKAEAFYS DEMEKWHSCS EDVEVRKVEL DIESVVVDNV RLSLNGILEG SVEQDMKEKE ILQKKKEHLA NELEELLALV
401: KAKEKEIDEN DSQIEAVEER INNVVTGFKE LQTSMDKMLN DVQAGLTEVD KETEDLSRKK KDVDEFMTSE KERGAKLRDL ARVSADEACE YEEVIKLRKG
501: LMSYVSKTRE ERAKLVNIEE KLSEEVQKLQ EEVSSTRELL KERSSKKSII QQNITSFMDK IMFIEKRMPE LEAEKKVAAS TRNFKEAGRI AAEAKSLNLE
601: KDKTQMETGK ANAELEKAEH EIEETIKRLQ EIEKLILSKE KELAISRFQR LRIDSGTAKA ERSAALELSD LEEANLLLEE AQEAESEAEK LKLTGGLKEE
701: EEEEEKAKSN EVFVSMELIA TVGLKKLQEL VESVPS
Arabidopsis Description
Neurofilament light protein [Source:UniProtKB/TrEMBL;Acc:Q8L4Q6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.