Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G248900.1 | Wheat | nucleus | 92.86 | 93.21 |
| HORVU7Hr1G051520.12 | Barley | cytosol, mitochondrion, nucleus, plastid | 75.56 | 90.68 |
| TraesCS7B01G141000.1 | Wheat | nucleus | 89.22 | 89.9 |
| EES14249 | Sorghum | nucleus | 69.05 | 70.28 |
| Zm00001d049744_P001 | Maize | nucleus | 66.92 | 68.9 |
| Zm00001d031489_P002 | Maize | nucleus | 67.17 | 66.25 |
| GSMUA_Achr1P27870_001 | Banana | nucleus | 45.24 | 47.07 |
| GSMUA_Achr9P20030_001 | Banana | nucleus | 41.98 | 42.09 |
| KRH66324 | Soybean | cytosol | 15.91 | 40.32 |
| VIT_18s0122g00110.t01 | Wine grape | nucleus | 38.6 | 39.34 |
| KRH77981 | Soybean | nucleus | 35.71 | 38.93 |
| PGSC0003DMT400065934 | Potato | nucleus | 36.22 | 37.15 |
| CDX74860 | Canola | nucleus | 32.21 | 36.77 |
| CDY44635 | Canola | nucleus | 33.21 | 36.5 |
| Bra005056.1-P | Field mustard | nucleus | 32.83 | 36.39 |
| AT5G25070.1 | Thale cress | cytosol | 33.08 | 35.87 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G250200.1 | EnsemblPlantsGene:TraesCS7A01G250200 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | InterPro:IPR001943 | InterPro:UVR_dom |
| ncoils:Coil | PANTHER:PTHR38394 | PFAM:PF02151 | PFscan:PS50151 | SEG:seg | MapMan:35.2 |
Description
No Description!
Coordinates
chr7A:-:232594490..232597664
Molecular Weight (calculated)
86563.9 Da
IEP (calculated)
4.324
GRAVY (calculated)
-0.545
Length
798 amino acids
Sequence
(BLAST)
(BLAST)
001: MASQDGGWGD GGDSLFEGMV LFAPADPAAA EAEEAPEPPK PPTPSPAAAS ASASDAESSA ASQPLDEDLF SDLTLLAPQP PLDQDQHPQP QAQDQNHRPP
101: SPVTPTPAAA ALSRQPSSSS LRKKKRAVRI GYGRSPQTAP TLPPTVPIAN TAAAPAPAAA AATATILRTT SSSSSLSDAS TYDAAPPIPV QYLDQPGNDD
201: ERDAAVVDPD ANSLDAVSIS SLDAKQEAKE EDGVKDAEEA GVAVVGIEER LALLRSQISG KLDSVQQRAA AVAAKRRQLA GRQRKVAEDV GSAASKHKDL
301: ERELEEACEA EDFERAERIS ESLAALEKDK DRLLTALRDA ELDYDSVDLE LQDVLESRIA VEEEAAALLE QFAKDATEHA DSVSKQAEEM SSKEIEGWQT
401: SMELLQIKKL EMEVETELVL AARSGLEGSV EHLIKDDKRE KDMLSKKGDT LTVELAELLE LVRLKEAEIA ENNAQIQEVQ ERISAVVSRF HGSQSDIDMK
501: INSLQESQTK IDQDTEALVL KKNEIDNCIS SAEQKDSDLR EIINACSSEA KACQQSVEIR RKLALSILKS RQDRIGLLKM EEEISQDIQM LRQQTTDART
601: SLQEISSKRA GIQQEMATCK QKLSFIDKRG PELEAEKKVA AAARNFKEAG RIAAEAKALN SEKEELRAKL EKAGTDLEVI EKDIAATTDK IQECEGLIVL
701: KEQESAMASY KRLRLDSSAA RAELTAATET DDGEEVEILR KEAEAAESKA LELKTLYNLQ PDSDEYIFQP VVPIAFITNS TWQHLAEMAS SFGLSPET
101: SPVTPTPAAA ALSRQPSSSS LRKKKRAVRI GYGRSPQTAP TLPPTVPIAN TAAAPAPAAA AATATILRTT SSSSSLSDAS TYDAAPPIPV QYLDQPGNDD
201: ERDAAVVDPD ANSLDAVSIS SLDAKQEAKE EDGVKDAEEA GVAVVGIEER LALLRSQISG KLDSVQQRAA AVAAKRRQLA GRQRKVAEDV GSAASKHKDL
301: ERELEEACEA EDFERAERIS ESLAALEKDK DRLLTALRDA ELDYDSVDLE LQDVLESRIA VEEEAAALLE QFAKDATEHA DSVSKQAEEM SSKEIEGWQT
401: SMELLQIKKL EMEVETELVL AARSGLEGSV EHLIKDDKRE KDMLSKKGDT LTVELAELLE LVRLKEAEIA ENNAQIQEVQ ERISAVVSRF HGSQSDIDMK
501: INSLQESQTK IDQDTEALVL KKNEIDNCIS SAEQKDSDLR EIINACSSEA KACQQSVEIR RKLALSILKS RQDRIGLLKM EEEISQDIQM LRQQTTDART
601: SLQEISSKRA GIQQEMATCK QKLSFIDKRG PELEAEKKVA AAARNFKEAG RIAAEAKALN SEKEELRAKL EKAGTDLEVI EKDIAATTDK IQECEGLIVL
701: KEQESAMASY KRLRLDSSAA RAELTAATET DDGEEVEILR KEAEAAESKA LELKTLYNLQ PDSDEYIFQP VVPIAFITNS TWQHLAEMAS SFGLSPET
001: MDGGDDMDSL FEGMELFTPA SQFSGDSKVS SPPQSEETKA AEATLITAPS QPDVTEATLI TATSQPDITE ALDENLFSDL TIVTPVQHQP EPMEAVITTH
101: QSPAKNYGRQ VSRRKKRAAG LRIGYGRHET NNLDEDEDDA VSQQSDSVSQ VSDSVSQISD SVAQVFDSGN QSLDSPVVTV VVGNGSSRLE LVKAQIEAKL
201: NRSRDLAASV TSARKNAIRK KRQASENLRL ASTTHEELEK QLEEAIETED FDAAERISES LAAKERDRLA LLALLRQAES DCDAIESKME EVLLSQIAAE
301: EESACLLRSF GTDAENDAGS ILEKAEAFYS DEMEKWHSCS EDVEVRKVEL DIESVVVDNV RLSLNGILEG SVEQDMKEKE ILQKKKEHLA NELEELLALV
401: KAKEKEIDEN DSQIEAVEER INNVVTGFKE LQTSMDKMLN DVQAGLTEVD KETEDLSRKK KDVDEFMTSE KERGAKLRDL ARVSADEACE YEEVIKLRKG
501: LMSYVSKTRE ERAKLVNIEE KLSEEVQKLQ EEVSSTRELL KERSSKKSII QQNITSFMDK IMFIEKRMPE LEAEKKVAAS TRNFKEAGRI AAEAKSLNLE
601: KDKTQMETGK ANAELEKAEH EIEETIKRLQ EIEKLILSKE KELAISRFQR LRIDSGTAKA ERSAALELSD LEEANLLLEE AQEAESEAEK LKLTGGLKEE
701: EEEEEKAKSN EVFVSMELIA TVGLKKLQEL VESVPS
101: QSPAKNYGRQ VSRRKKRAAG LRIGYGRHET NNLDEDEDDA VSQQSDSVSQ VSDSVSQISD SVAQVFDSGN QSLDSPVVTV VVGNGSSRLE LVKAQIEAKL
201: NRSRDLAASV TSARKNAIRK KRQASENLRL ASTTHEELEK QLEEAIETED FDAAERISES LAAKERDRLA LLALLRQAES DCDAIESKME EVLLSQIAAE
301: EESACLLRSF GTDAENDAGS ILEKAEAFYS DEMEKWHSCS EDVEVRKVEL DIESVVVDNV RLSLNGILEG SVEQDMKEKE ILQKKKEHLA NELEELLALV
401: KAKEKEIDEN DSQIEAVEER INNVVTGFKE LQTSMDKMLN DVQAGLTEVD KETEDLSRKK KDVDEFMTSE KERGAKLRDL ARVSADEACE YEEVIKLRKG
501: LMSYVSKTRE ERAKLVNIEE KLSEEVQKLQ EEVSSTRELL KERSSKKSII QQNITSFMDK IMFIEKRMPE LEAEKKVAAS TRNFKEAGRI AAEAKSLNLE
601: KDKTQMETGK ANAELEKAEH EIEETIKRLQ EIEKLILSKE KELAISRFQR LRIDSGTAKA ERSAALELSD LEEANLLLEE AQEAESEAEK LKLTGGLKEE
701: EEEEEKAKSN EVFVSMELIA TVGLKKLQEL VESVPS
Arabidopsis Description
Neurofilament light protein [Source:UniProtKB/TrEMBL;Acc:Q8L4Q6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.