Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P27870_001 | Banana | nucleus | 60.93 | 63.23 |
| HORVU7Hr1G051520.12 | Barley | cytosol, mitochondrion, nucleus, plastid | 37.06 | 44.36 |
| EES14249 | Sorghum | nucleus | 43.47 | 44.13 |
| Zm00001d049744_P001 | Maize | nucleus | 41.33 | 42.45 |
| Zm00001d031489_P002 | Maize | nucleus | 43.09 | 42.4 |
| TraesCS7A01G250200.1 | Wheat | nucleus | 42.09 | 41.98 |
| TraesCS7D01G248900.1 | Wheat | nucleus | 41.83 | 41.89 |
| TraesCS7B01G141000.1 | Wheat | nucleus | 41.58 | 41.79 |
| VIT_18s0122g00110.t01 | Wine grape | nucleus | 39.95 | 40.61 |
| KRH66324 | Soybean | cytosol | 15.95 | 40.32 |
| KRH77981 | Soybean | nucleus | 34.8 | 37.84 |
| PGSC0003DMT400065934 | Potato | nucleus | 36.68 | 37.53 |
| CDX74860 | Canola | nucleus | 32.79 | 37.34 |
| CDY44635 | Canola | nucleus | 33.42 | 36.64 |
| Bra005056.1-P | Field mustard | nucleus | 33.04 | 36.53 |
| AT5G25070.1 | Thale cress | cytosol | 32.91 | 35.6 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P20030_001 | EnsemblPlants:GSMUA_Achr9T20030_001 | EnsemblPlantsGene:GSMUA_Achr9G20030_001 | ncoils:Coil | PANTHER:PTHR38394 | SEG:seg |
| UniParc:UPI000295442D | UniProt:M0U1W2 | MapMan:35.2 | : | : | : |
Description
Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G20030_001]
Coordinates
chr9:-:22833623..22841540
Molecular Weight (calculated)
87941.9 Da
IEP (calculated)
4.550
GRAVY (calculated)
-0.497
Length
796 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVELLDHAL RLRHNRIDRL SFWPLPACLP RSVSSFMASS SSEAGFDEAI NGSLFDGMVL FVPSSVDISL PQVGASLPPP PDAAATSQPQ SKPLPVDEDL
101: FSDLTLQNLP SPTPSPLDPP TPSPLPTPTP TPSPPSSHLQ PPAFPSRQSS RKKKRAVRIG YARETAGPAA ALSEDVHHLS DPLHEPPTFS YDLGVGSAPH
201: PDTAISVVEN DPTPGPPPSK SLEQLREVTD YGSSCEAVVK EDKGHQPPME EGEDEYICSE ESAAREGAFD SAEEGLQVVR AQISKNLESI QQRAASAYAE
301: RKELERRRRT AVETVNSASA KHKDLERELE LACEAEDFER AERVSQNLMT MEEEKNKLLL SLREAEADCE VAESKMLEVL ELQIAAEEEG VFLLQQFSKD
401: AANSAESVLK NAEKESCEEL EEWQSSVELL EVKKLEMDIE SLLVSEACSG LENAIEDLVK NDREEKEMLT RKGVVLAKEL DELRELVILK ETEIADNKCQ
501: IQDVEKRISN VVFKGIVKKK KEIDENISLS EEKRKKLMEL SEISSAEAKT CKDLVGLKKH LSSLVLKSRE DRVKFSKTEE KILEDIQILR EEILAARTAL
601: QDLSSGRASI QQEVALYKQR IDFIEKRGPE LEAEKKVAAA ARNFKEAGRV ATEAKALHNA KEDLQHKKEK SILHLEKLEE EIKSNVDKIQ ENEGLILLKE
701: KEAALAGCNR LQLVAAAARA ERLAALKMGD LEEGNMLLQE AEAAESEARE IQEVYNFDVE VDGKNFVSVA FITNLNGDHL TEVASLNLPA VAGTQS
101: FSDLTLQNLP SPTPSPLDPP TPSPLPTPTP TPSPPSSHLQ PPAFPSRQSS RKKKRAVRIG YARETAGPAA ALSEDVHHLS DPLHEPPTFS YDLGVGSAPH
201: PDTAISVVEN DPTPGPPPSK SLEQLREVTD YGSSCEAVVK EDKGHQPPME EGEDEYICSE ESAAREGAFD SAEEGLQVVR AQISKNLESI QQRAASAYAE
301: RKELERRRRT AVETVNSASA KHKDLERELE LACEAEDFER AERVSQNLMT MEEEKNKLLL SLREAEADCE VAESKMLEVL ELQIAAEEEG VFLLQQFSKD
401: AANSAESVLK NAEKESCEEL EEWQSSVELL EVKKLEMDIE SLLVSEACSG LENAIEDLVK NDREEKEMLT RKGVVLAKEL DELRELVILK ETEIADNKCQ
501: IQDVEKRISN VVFKGIVKKK KEIDENISLS EEKRKKLMEL SEISSAEAKT CKDLVGLKKH LSSLVLKSRE DRVKFSKTEE KILEDIQILR EEILAARTAL
601: QDLSSGRASI QQEVALYKQR IDFIEKRGPE LEAEKKVAAA ARNFKEAGRV ATEAKALHNA KEDLQHKKEK SILHLEKLEE EIKSNVDKIQ ENEGLILLKE
701: KEAALAGCNR LQLVAAAARA ERLAALKMGD LEEGNMLLQE AEAAESEARE IQEVYNFDVE VDGKNFVSVA FITNLNGDHL TEVASLNLPA VAGTQS
001: MDGGDDMDSL FEGMELFTPA SQFSGDSKVS SPPQSEETKA AEATLITAPS QPDVTEATLI TATSQPDITE ALDENLFSDL TIVTPVQHQP EPMEAVITTH
101: QSPAKNYGRQ VSRRKKRAAG LRIGYGRHET NNLDEDEDDA VSQQSDSVSQ VSDSVSQISD SVAQVFDSGN QSLDSPVVTV VVGNGSSRLE LVKAQIEAKL
201: NRSRDLAASV TSARKNAIRK KRQASENLRL ASTTHEELEK QLEEAIETED FDAAERISES LAAKERDRLA LLALLRQAES DCDAIESKME EVLLSQIAAE
301: EESACLLRSF GTDAENDAGS ILEKAEAFYS DEMEKWHSCS EDVEVRKVEL DIESVVVDNV RLSLNGILEG SVEQDMKEKE ILQKKKEHLA NELEELLALV
401: KAKEKEIDEN DSQIEAVEER INNVVTGFKE LQTSMDKMLN DVQAGLTEVD KETEDLSRKK KDVDEFMTSE KERGAKLRDL ARVSADEACE YEEVIKLRKG
501: LMSYVSKTRE ERAKLVNIEE KLSEEVQKLQ EEVSSTRELL KERSSKKSII QQNITSFMDK IMFIEKRMPE LEAEKKVAAS TRNFKEAGRI AAEAKSLNLE
601: KDKTQMETGK ANAELEKAEH EIEETIKRLQ EIEKLILSKE KELAISRFQR LRIDSGTAKA ERSAALELSD LEEANLLLEE AQEAESEAEK LKLTGGLKEE
701: EEEEEKAKSN EVFVSMELIA TVGLKKLQEL VESVPS
101: QSPAKNYGRQ VSRRKKRAAG LRIGYGRHET NNLDEDEDDA VSQQSDSVSQ VSDSVSQISD SVAQVFDSGN QSLDSPVVTV VVGNGSSRLE LVKAQIEAKL
201: NRSRDLAASV TSARKNAIRK KRQASENLRL ASTTHEELEK QLEEAIETED FDAAERISES LAAKERDRLA LLALLRQAES DCDAIESKME EVLLSQIAAE
301: EESACLLRSF GTDAENDAGS ILEKAEAFYS DEMEKWHSCS EDVEVRKVEL DIESVVVDNV RLSLNGILEG SVEQDMKEKE ILQKKKEHLA NELEELLALV
401: KAKEKEIDEN DSQIEAVEER INNVVTGFKE LQTSMDKMLN DVQAGLTEVD KETEDLSRKK KDVDEFMTSE KERGAKLRDL ARVSADEACE YEEVIKLRKG
501: LMSYVSKTRE ERAKLVNIEE KLSEEVQKLQ EEVSSTRELL KERSSKKSII QQNITSFMDK IMFIEKRMPE LEAEKKVAAS TRNFKEAGRI AAEAKSLNLE
601: KDKTQMETGK ANAELEKAEH EIEETIKRLQ EIEKLILSKE KELAISRFQR LRIDSGTAKA ERSAALELSD LEEANLLLEE AQEAESEAEK LKLTGGLKEE
701: EEEEEKAKSN EVFVSMELIA TVGLKKLQEL VESVPS
Arabidopsis Description
Neurofilament light protein [Source:UniProtKB/TrEMBL;Acc:Q8L4Q6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.