Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G250200.1 | Wheat | nucleus | 90.68 | 75.56 |
| TraesCS7B01G141000.1 | Wheat | nucleus | 88.87 | 74.62 |
| TraesCS7D01G248900.1 | Wheat | nucleus | 88.42 | 73.96 |
| EES14249 | Sorghum | nucleus | 73.68 | 62.5 |
| Zm00001d049744_P001 | Maize | nucleus | 71.43 | 61.29 |
| Zm00001d031489_P002 | Maize | nucleus | 72.48 | 59.58 |
| GSMUA_Achr1P27870_001 | Banana | nucleus | 47.67 | 41.33 |
| KRH66324 | Soybean | cytosol | 18.65 | 39.37 |
| GSMUA_Achr9P20030_001 | Banana | nucleus | 44.36 | 37.06 |
| VIT_18s0122g00110.t01 | Wine grape | nucleus | 40.3 | 34.23 |
| KRH77981 | Soybean | nucleus | 36.99 | 33.61 |
| PGSC0003DMT400065934 | Potato | nucleus | 36.69 | 31.36 |
| CDX74860 | Canola | nucleus | 32.78 | 31.19 |
| AT5G25070.1 | Thale cress | cytosol | 34.14 | 30.84 |
| CDY44635 | Canola | nucleus | 33.38 | 30.58 |
| Bra005056.1-P | Field mustard | nucleus | 33.08 | 30.56 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G051520.12 | EnsemblPlantsGene:HORVU7Hr1G051520 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | InterPro:IPR001943 | InterPro:UVR_dom |
| ncoils:Coil | PANTHER:PTHR38394 | PFAM:PF02151 | PFscan:PS50151 | SEG:seg | UniParc:UPI000B47F9A0 |
| UniProt:A0A287WH49 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr7H:-:193816462..193821775
Molecular Weight (calculated)
72689.0 Da
IEP (calculated)
4.387
GRAVY (calculated)
-0.495
Length
665 amino acids
Sequence
(BLAST)
(BLAST)
001: GYGRSPQTAP ALPPTAPIAT TTAPAAAAAT ATVIRTASSS SSLSDASAYD AAPPIPVQYL DRLGNRGEED AAVVDPDANS LDAVSVNSLD SKQEGKEEDG
101: DKNVGGAGVA VVGIEERLAL LRSQVSSKLD SVQQRAAAVA AKRRQLAGRQ RKVAEDVGSA ASKHKDLERE LEEACEAEDF ERAERISDSL AALEKDKDRL
201: LTALRDAELD YDSVDLELQD VLESRIAVEE EAAALLEQFA KDATEHANFV SKQAEEMSSK EIEGWQTSME LLQISKLEME VETELVLAAR SGLEGSVEHL
301: IKEDKREKDM LSKKGDTLTV ELAELLELVR LKEAEIAENN AQIQEVQERI SAVVSRFHGS QSDIDIKINS LQESQAKIDQ DTEALVLKKN EIDNCISSAE
401: QKDSDLREII NACSSEAKAC QQSVEIRRKL ASSILKSRQD RIGLLKMEEE ISQDIQMLRQ QTTDARTSLQ EISSKRAGIQ QEIATCKQKL SFIDKRGPEL
501: EAEKKVAAAA RNFKEAGRIA AEAKALNSEK EELRAKLEKA GTDLEAIEKD IAATTDKIQE CEGLIVLKEQ ESAMASYKRL RLDSSAARAE LTAATETDDS
601: EELEILRKEA EAAESKALEL KTLYNLQPDS DEYIFQPVVP IAFITNSTWQ HLAEMASSFG LSLDS
101: DKNVGGAGVA VVGIEERLAL LRSQVSSKLD SVQQRAAAVA AKRRQLAGRQ RKVAEDVGSA ASKHKDLERE LEEACEAEDF ERAERISDSL AALEKDKDRL
201: LTALRDAELD YDSVDLELQD VLESRIAVEE EAAALLEQFA KDATEHANFV SKQAEEMSSK EIEGWQTSME LLQISKLEME VETELVLAAR SGLEGSVEHL
301: IKEDKREKDM LSKKGDTLTV ELAELLELVR LKEAEIAENN AQIQEVQERI SAVVSRFHGS QSDIDIKINS LQESQAKIDQ DTEALVLKKN EIDNCISSAE
401: QKDSDLREII NACSSEAKAC QQSVEIRRKL ASSILKSRQD RIGLLKMEEE ISQDIQMLRQ QTTDARTSLQ EISSKRAGIQ QEIATCKQKL SFIDKRGPEL
501: EAEKKVAAAA RNFKEAGRIA AEAKALNSEK EELRAKLEKA GTDLEAIEKD IAATTDKIQE CEGLIVLKEQ ESAMASYKRL RLDSSAARAE LTAATETDDS
601: EELEILRKEA EAAESKALEL KTLYNLQPDS DEYIFQPVVP IAFITNSTWQ HLAEMASSFG LSLDS
001: MDGGDDMDSL FEGMELFTPA SQFSGDSKVS SPPQSEETKA AEATLITAPS QPDVTEATLI TATSQPDITE ALDENLFSDL TIVTPVQHQP EPMEAVITTH
101: QSPAKNYGRQ VSRRKKRAAG LRIGYGRHET NNLDEDEDDA VSQQSDSVSQ VSDSVSQISD SVAQVFDSGN QSLDSPVVTV VVGNGSSRLE LVKAQIEAKL
201: NRSRDLAASV TSARKNAIRK KRQASENLRL ASTTHEELEK QLEEAIETED FDAAERISES LAAKERDRLA LLALLRQAES DCDAIESKME EVLLSQIAAE
301: EESACLLRSF GTDAENDAGS ILEKAEAFYS DEMEKWHSCS EDVEVRKVEL DIESVVVDNV RLSLNGILEG SVEQDMKEKE ILQKKKEHLA NELEELLALV
401: KAKEKEIDEN DSQIEAVEER INNVVTGFKE LQTSMDKMLN DVQAGLTEVD KETEDLSRKK KDVDEFMTSE KERGAKLRDL ARVSADEACE YEEVIKLRKG
501: LMSYVSKTRE ERAKLVNIEE KLSEEVQKLQ EEVSSTRELL KERSSKKSII QQNITSFMDK IMFIEKRMPE LEAEKKVAAS TRNFKEAGRI AAEAKSLNLE
601: KDKTQMETGK ANAELEKAEH EIEETIKRLQ EIEKLILSKE KELAISRFQR LRIDSGTAKA ERSAALELSD LEEANLLLEE AQEAESEAEK LKLTGGLKEE
701: EEEEEKAKSN EVFVSMELIA TVGLKKLQEL VESVPS
101: QSPAKNYGRQ VSRRKKRAAG LRIGYGRHET NNLDEDEDDA VSQQSDSVSQ VSDSVSQISD SVAQVFDSGN QSLDSPVVTV VVGNGSSRLE LVKAQIEAKL
201: NRSRDLAASV TSARKNAIRK KRQASENLRL ASTTHEELEK QLEEAIETED FDAAERISES LAAKERDRLA LLALLRQAES DCDAIESKME EVLLSQIAAE
301: EESACLLRSF GTDAENDAGS ILEKAEAFYS DEMEKWHSCS EDVEVRKVEL DIESVVVDNV RLSLNGILEG SVEQDMKEKE ILQKKKEHLA NELEELLALV
401: KAKEKEIDEN DSQIEAVEER INNVVTGFKE LQTSMDKMLN DVQAGLTEVD KETEDLSRKK KDVDEFMTSE KERGAKLRDL ARVSADEACE YEEVIKLRKG
501: LMSYVSKTRE ERAKLVNIEE KLSEEVQKLQ EEVSSTRELL KERSSKKSII QQNITSFMDK IMFIEKRMPE LEAEKKVAAS TRNFKEAGRI AAEAKSLNLE
601: KDKTQMETGK ANAELEKAEH EIEETIKRLQ EIEKLILSKE KELAISRFQR LRIDSGTAKA ERSAALELSD LEEANLLLEE AQEAESEAEK LKLTGGLKEE
701: EEEEEKAKSN EVFVSMELIA TVGLKKLQEL VESVPS
Arabidopsis Description
Neurofilament light protein [Source:UniProtKB/TrEMBL;Acc:Q8L4Q6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.