Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d049744_P001 | Maize | nucleus | 85.46 | 86.45 |
| HORVU7Hr1G051520.12 | Barley | cytosol, mitochondrion, nucleus, plastid | 62.5 | 73.68 |
| TraesCS7B01G141000.1 | Wheat | nucleus | 70.41 | 69.7 |
| TraesCS7A01G250200.1 | Wheat | nucleus | 70.28 | 69.05 |
| TraesCS7D01G248900.1 | Wheat | nucleus | 69.52 | 68.55 |
| GSMUA_Achr1P27870_001 | Banana | nucleus | 46.3 | 47.33 |
| GSMUA_Achr9P20030_001 | Banana | nucleus | 44.13 | 43.47 |
| KRH66324 | Soybean | cytosol | 16.58 | 41.27 |
| KRH77981 | Soybean | nucleus | 35.84 | 38.39 |
| VIT_18s0122g00110.t01 | Wine grape | nucleus | 38.01 | 38.06 |
| CDX74860 | Canola | nucleus | 33.93 | 38.05 |
| CDY44635 | Canola | nucleus | 35.2 | 38.02 |
| Bra005056.1-P | Field mustard | nucleus | 34.44 | 37.5 |
| AT5G25070.1 | Thale cress | cytosol | 34.18 | 36.41 |
| PGSC0003DMT400065934 | Potato | nucleus | 35.46 | 35.73 |
Protein Annotations
| MapMan:35.2 | EntrezGene:8081351 | UniProt:C5YIM9 | ncoils:Coil | EnsemblPlants:EES14249 | ProteinID:EES14249 |
| ProteinID:EES14249.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | InterPro:IPR001943 | PFAM:PF02151 | PFscan:PS50151 |
| PANTHER:PTHR38394 | EnsemblPlantsGene:SORBI_3007G205900 | unigene:Sbi.12005 | UniParc:UPI0001A87E33 | InterPro:UVR_dom | RefSeq:XP_002444754.1 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr7:+:63602938..63606854
Molecular Weight (calculated)
85564.2 Da
IEP (calculated)
4.366
GRAVY (calculated)
-0.510
Length
784 amino acids
Sequence
(BLAST)
(BLAST)
001: MASQDDGWGG GEDGGSLFEG MVLFAPEPTA AEDSVPAPAP APVPELPPAA LPDADAASSA PPPLDEDLFS DLTLLAPQEP LSLEQQPPPP LPPQGEDRSH
101: TAVVPAAPAA ATALSRQPSS SSLRKKKRAV RIGYGRSPQP APPSPPATVR ASAAAAAISA SSIAFLDASP HPAATRSLDQ VPDRQVDGYA NGYEAHAEAV
201: DVDTNSPRVE EAAKDEDDDG EEDGDTGVAA LGIVERLALL RSQISGKLDT IQQRAAAVAA KRRLLAGRRR KVAEEAASVA SSHKDMEREL EEACEAEDFE
301: KAERISDSLA ALEKEKDRLL TVLRDAELDY DSVDSELQEV LESRIAAEEE AASLLEQFAK DATEHANSES KQAEELSTKE IEGWQTSMEL LETKKLEMEV
401: ETQLVLEARS GLEGSIEHLV EEDKLEKDIL SKKGEILTKE LAELLEFVRL KEAEIAENNA RIHQVQERIS AVVSKFHGSQ SDIDLKLNSL KEAQSKVDLE
501: TEALVLKKNE IDKFISLSEQ KDSELREIIG ACSSEAKTCQ QSVEIRRKLA SSILKSREDR IGLLKMEEEI LQEIQMLRQK ITDARTTLQE VSSRRTSIQQ
601: EMDSFKQKLS FIDKRGPELE AEKKVAAAAR NFKEAGRIAA EAKALNSEKD ELHCKLEKAS TDLEIIEKDI VATTDKIQEC EGLIVLKEKD SALTSYKRLR
701: LDCAAARAEL TAATETDDNE EVEILRKEAE AAESKAIELK TCYDLQVEDD EFMFQPVVPI AFITNSTGQH LSEIASSFGL SPQK
101: TAVVPAAPAA ATALSRQPSS SSLRKKKRAV RIGYGRSPQP APPSPPATVR ASAAAAAISA SSIAFLDASP HPAATRSLDQ VPDRQVDGYA NGYEAHAEAV
201: DVDTNSPRVE EAAKDEDDDG EEDGDTGVAA LGIVERLALL RSQISGKLDT IQQRAAAVAA KRRLLAGRRR KVAEEAASVA SSHKDMEREL EEACEAEDFE
301: KAERISDSLA ALEKEKDRLL TVLRDAELDY DSVDSELQEV LESRIAAEEE AASLLEQFAK DATEHANSES KQAEELSTKE IEGWQTSMEL LETKKLEMEV
401: ETQLVLEARS GLEGSIEHLV EEDKLEKDIL SKKGEILTKE LAELLEFVRL KEAEIAENNA RIHQVQERIS AVVSKFHGSQ SDIDLKLNSL KEAQSKVDLE
501: TEALVLKKNE IDKFISLSEQ KDSELREIIG ACSSEAKTCQ QSVEIRRKLA SSILKSREDR IGLLKMEEEI LQEIQMLRQK ITDARTTLQE VSSRRTSIQQ
601: EMDSFKQKLS FIDKRGPELE AEKKVAAAAR NFKEAGRIAA EAKALNSEKD ELHCKLEKAS TDLEIIEKDI VATTDKIQEC EGLIVLKEKD SALTSYKRLR
701: LDCAAARAEL TAATETDDNE EVEILRKEAE AAESKAIELK TCYDLQVEDD EFMFQPVVPI AFITNSTGQH LSEIASSFGL SPQK
001: MDGGDDMDSL FEGMELFTPA SQFSGDSKVS SPPQSEETKA AEATLITAPS QPDVTEATLI TATSQPDITE ALDENLFSDL TIVTPVQHQP EPMEAVITTH
101: QSPAKNYGRQ VSRRKKRAAG LRIGYGRHET NNLDEDEDDA VSQQSDSVSQ VSDSVSQISD SVAQVFDSGN QSLDSPVVTV VVGNGSSRLE LVKAQIEAKL
201: NRSRDLAASV TSARKNAIRK KRQASENLRL ASTTHEELEK QLEEAIETED FDAAERISES LAAKERDRLA LLALLRQAES DCDAIESKME EVLLSQIAAE
301: EESACLLRSF GTDAENDAGS ILEKAEAFYS DEMEKWHSCS EDVEVRKVEL DIESVVVDNV RLSLNGILEG SVEQDMKEKE ILQKKKEHLA NELEELLALV
401: KAKEKEIDEN DSQIEAVEER INNVVTGFKE LQTSMDKMLN DVQAGLTEVD KETEDLSRKK KDVDEFMTSE KERGAKLRDL ARVSADEACE YEEVIKLRKG
501: LMSYVSKTRE ERAKLVNIEE KLSEEVQKLQ EEVSSTRELL KERSSKKSII QQNITSFMDK IMFIEKRMPE LEAEKKVAAS TRNFKEAGRI AAEAKSLNLE
601: KDKTQMETGK ANAELEKAEH EIEETIKRLQ EIEKLILSKE KELAISRFQR LRIDSGTAKA ERSAALELSD LEEANLLLEE AQEAESEAEK LKLTGGLKEE
701: EEEEEKAKSN EVFVSMELIA TVGLKKLQEL VESVPS
101: QSPAKNYGRQ VSRRKKRAAG LRIGYGRHET NNLDEDEDDA VSQQSDSVSQ VSDSVSQISD SVAQVFDSGN QSLDSPVVTV VVGNGSSRLE LVKAQIEAKL
201: NRSRDLAASV TSARKNAIRK KRQASENLRL ASTTHEELEK QLEEAIETED FDAAERISES LAAKERDRLA LLALLRQAES DCDAIESKME EVLLSQIAAE
301: EESACLLRSF GTDAENDAGS ILEKAEAFYS DEMEKWHSCS EDVEVRKVEL DIESVVVDNV RLSLNGILEG SVEQDMKEKE ILQKKKEHLA NELEELLALV
401: KAKEKEIDEN DSQIEAVEER INNVVTGFKE LQTSMDKMLN DVQAGLTEVD KETEDLSRKK KDVDEFMTSE KERGAKLRDL ARVSADEACE YEEVIKLRKG
501: LMSYVSKTRE ERAKLVNIEE KLSEEVQKLQ EEVSSTRELL KERSSKKSII QQNITSFMDK IMFIEKRMPE LEAEKKVAAS TRNFKEAGRI AAEAKSLNLE
601: KDKTQMETGK ANAELEKAEH EIEETIKRLQ EIEKLILSKE KELAISRFQR LRIDSGTAKA ERSAALELSD LEEANLLLEE AQEAESEAEK LKLTGGLKEE
701: EEEEEKAKSN EVFVSMELIA TVGLKKLQEL VESVPS
Arabidopsis Description
Neurofilament light protein [Source:UniProtKB/TrEMBL;Acc:Q8L4Q6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.