Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P20030_001 | Banana | nucleus | 63.23 | 60.93 |
| HORVU7Hr1G051520.12 | Barley | cytosol, mitochondrion, nucleus, plastid | 41.33 | 47.67 |
| EES14249 | Sorghum | nucleus | 47.33 | 46.3 |
| Zm00001d049744_P001 | Maize | nucleus | 46.02 | 45.55 |
| TraesCS7A01G250200.1 | Wheat | nucleus | 47.07 | 45.24 |
| TraesCS7B01G141000.1 | Wheat | nucleus | 46.41 | 44.95 |
| TraesCS7D01G248900.1 | Wheat | nucleus | 46.15 | 44.53 |
| KRH66324 | Soybean | cytosol | 18.25 | 44.44 |
| Zm00001d031489_P002 | Maize | nucleus | 46.15 | 43.76 |
| VIT_18s0122g00110.t01 | Wine grape | nucleus | 43.16 | 42.27 |
| CDX74860 | Canola | nucleus | 35.85 | 39.34 |
| KRH77981 | Soybean | nucleus | 36.77 | 38.52 |
| CDY44635 | Canola | nucleus | 36.38 | 38.43 |
| PGSC0003DMT400065934 | Potato | nucleus | 38.85 | 38.3 |
| Bra005056.1-P | Field mustard | nucleus | 35.72 | 38.06 |
| AT5G25070.1 | Thale cress | cytosol | 35.33 | 36.82 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P27870_001 | EnsemblPlants:GSMUA_Achr1T27870_001 | EnsemblPlantsGene:GSMUA_Achr1G27870_001 | ncoils:Coil | PANTHER:PTHR38394 | SEG:seg |
| UniParc:UPI000296AF4D | UniProt:M0S3P4 | MapMan:35.2 | : | : | : |
Description
Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G27870_001]
Coordinates
chr1:-:26427815..26432383
Molecular Weight (calculated)
84287.3 Da
IEP (calculated)
4.536
GRAVY (calculated)
-0.513
Length
767 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSSEGGGD GSLNGSLFDG MVLFTPSSFT DPSLPQPAAS PPPDVAAAAA QPQPESQPFD EDLFSDLTIQ TPPSPTATLR DPPPPTLPPL PSSPRQPPAL
101: LPRQPSRKKK RAVRIGYARE TAAAAAASSD DSHHLSDPVC NKSPPPSCGA TAIAVANESM ADESLTSPHD ASVDSAAHHD TAMPARPTEG RGEEEETCSS
201: GGSATGDGVF GSAEERLQLV RTQISKKLES VRQRAASAYA ERKELERSRR RAVESVNAAS TKHRDLEKDL ELACEAEDFE RAESVSENLM TVEEEKAKLL
301: LSLREAEADC ELAELKMQEV LELQIAVEEE CIDLLEQFAK DAADCAESIL KNAEETSCKE IEEWQSSVEL LEVKKLEMDI ELQLISEAHS GLENAIEDLV
401: KNEREEKEML ARKGVILEKE LDELLELVRL KEAEIAENKS QIQDVDNRIS NVASKFHETQ SIIDMKHKTL QEAFLKVESE DGALLIRKEE IDEVISSAEK
501: KRRKLIELSA IASNEAKTCQ DLLQLKKQLA SFILKSREDR VRYSKTEEKI SEDIQILRQE ISAARTALQE LSSTRASIQQ EVTLYKQRIG FIEKRGPELE
601: AEKKVAAAAR NFREAGRVAA EAKSLHIEKE DLQHKKEKAV LHLEKLEEEI GSNVETIQKN EELVLLKEKE AALAGCNRLQ LVAAAARAER SVALKMGDLE
701: EGSLLLKEAE ALESKVMELQ KVYNLDTEMD EKNLVSLAFI TNLVGDHLSE AGQVASFNLN AIVGSQS
101: LPRQPSRKKK RAVRIGYARE TAAAAAASSD DSHHLSDPVC NKSPPPSCGA TAIAVANESM ADESLTSPHD ASVDSAAHHD TAMPARPTEG RGEEEETCSS
201: GGSATGDGVF GSAEERLQLV RTQISKKLES VRQRAASAYA ERKELERSRR RAVESVNAAS TKHRDLEKDL ELACEAEDFE RAESVSENLM TVEEEKAKLL
301: LSLREAEADC ELAELKMQEV LELQIAVEEE CIDLLEQFAK DAADCAESIL KNAEETSCKE IEEWQSSVEL LEVKKLEMDI ELQLISEAHS GLENAIEDLV
401: KNEREEKEML ARKGVILEKE LDELLELVRL KEAEIAENKS QIQDVDNRIS NVASKFHETQ SIIDMKHKTL QEAFLKVESE DGALLIRKEE IDEVISSAEK
501: KRRKLIELSA IASNEAKTCQ DLLQLKKQLA SFILKSREDR VRYSKTEEKI SEDIQILRQE ISAARTALQE LSSTRASIQQ EVTLYKQRIG FIEKRGPELE
601: AEKKVAAAAR NFREAGRVAA EAKSLHIEKE DLQHKKEKAV LHLEKLEEEI GSNVETIQKN EELVLLKEKE AALAGCNRLQ LVAAAARAER SVALKMGDLE
701: EGSLLLKEAE ALESKVMELQ KVYNLDTEMD EKNLVSLAFI TNLVGDHLSE AGQVASFNLN AIVGSQS
001: MDGGDDMDSL FEGMELFTPA SQFSGDSKVS SPPQSEETKA AEATLITAPS QPDVTEATLI TATSQPDITE ALDENLFSDL TIVTPVQHQP EPMEAVITTH
101: QSPAKNYGRQ VSRRKKRAAG LRIGYGRHET NNLDEDEDDA VSQQSDSVSQ VSDSVSQISD SVAQVFDSGN QSLDSPVVTV VVGNGSSRLE LVKAQIEAKL
201: NRSRDLAASV TSARKNAIRK KRQASENLRL ASTTHEELEK QLEEAIETED FDAAERISES LAAKERDRLA LLALLRQAES DCDAIESKME EVLLSQIAAE
301: EESACLLRSF GTDAENDAGS ILEKAEAFYS DEMEKWHSCS EDVEVRKVEL DIESVVVDNV RLSLNGILEG SVEQDMKEKE ILQKKKEHLA NELEELLALV
401: KAKEKEIDEN DSQIEAVEER INNVVTGFKE LQTSMDKMLN DVQAGLTEVD KETEDLSRKK KDVDEFMTSE KERGAKLRDL ARVSADEACE YEEVIKLRKG
501: LMSYVSKTRE ERAKLVNIEE KLSEEVQKLQ EEVSSTRELL KERSSKKSII QQNITSFMDK IMFIEKRMPE LEAEKKVAAS TRNFKEAGRI AAEAKSLNLE
601: KDKTQMETGK ANAELEKAEH EIEETIKRLQ EIEKLILSKE KELAISRFQR LRIDSGTAKA ERSAALELSD LEEANLLLEE AQEAESEAEK LKLTGGLKEE
701: EEEEEKAKSN EVFVSMELIA TVGLKKLQEL VESVPS
101: QSPAKNYGRQ VSRRKKRAAG LRIGYGRHET NNLDEDEDDA VSQQSDSVSQ VSDSVSQISD SVAQVFDSGN QSLDSPVVTV VVGNGSSRLE LVKAQIEAKL
201: NRSRDLAASV TSARKNAIRK KRQASENLRL ASTTHEELEK QLEEAIETED FDAAERISES LAAKERDRLA LLALLRQAES DCDAIESKME EVLLSQIAAE
301: EESACLLRSF GTDAENDAGS ILEKAEAFYS DEMEKWHSCS EDVEVRKVEL DIESVVVDNV RLSLNGILEG SVEQDMKEKE ILQKKKEHLA NELEELLALV
401: KAKEKEIDEN DSQIEAVEER INNVVTGFKE LQTSMDKMLN DVQAGLTEVD KETEDLSRKK KDVDEFMTSE KERGAKLRDL ARVSADEACE YEEVIKLRKG
501: LMSYVSKTRE ERAKLVNIEE KLSEEVQKLQ EEVSSTRELL KERSSKKSII QQNITSFMDK IMFIEKRMPE LEAEKKVAAS TRNFKEAGRI AAEAKSLNLE
601: KDKTQMETGK ANAELEKAEH EIEETIKRLQ EIEKLILSKE KELAISRFQR LRIDSGTAKA ERSAALELSD LEEANLLLEE AQEAESEAEK LKLTGGLKEE
701: EEEEEKAKSN EVFVSMELIA TVGLKKLQEL VESVPS
Arabidopsis Description
Neurofilament light protein [Source:UniProtKB/TrEMBL;Acc:Q8L4Q6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.