Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78502 | Canola | plastid | 95.99 | 88.71 |
| CDX70490 | Canola | plastid | 95.29 | 86.12 |
| Bra008862.1-P | Field mustard | plastid | 88.66 | 79.13 |
| AT5G13030.1 | Thale cress | plastid | 87.26 | 78.99 |
| HORVU7Hr1G046290.3 | Barley | cytosol | 73.12 | 77.45 |
| GSMUA_Achr3P11720_001 | Banana | cytosol | 76.79 | 77.19 |
| VIT_06s0004g01360.t01 | Wine grape | cytosol | 77.49 | 77.08 |
| PGSC0003DMT400082019 | Potato | cytosol | 75.74 | 75.61 |
| Solyc01g006490.2.1 | Tomato | cytosol | 75.74 | 75.61 |
| GSMUA_Achr7P06390_001 | Banana | cytosol | 69.81 | 73.94 |
| KRG93074 | Soybean | nucleus | 74.87 | 72.71 |
| TraesCS7D01G227400.2 | Wheat | mitochondrion | 73.65 | 68.28 |
| TraesCS7A01G227000.1 | Wheat | mitochondrion | 73.65 | 68.28 |
| TraesCS7B01G192600.1 | Wheat | mitochondrion | 73.3 | 67.96 |
| Os06t0320700-01 | Rice | plasma membrane | 74.0 | 67.73 |
| Solyc12g100200.1.1 | Tomato | plastid | 72.6 | 67.31 |
| Zm00001d045897_P003 | Maize | plastid | 74.87 | 66.61 |
| OQU76338 | Sorghum | mitochondrion | 67.89 | 57.63 |
Protein Annotations
Description
AT5G13030 (E=3e-282) | unknown protein
Coordinates
chrA03:+:2361056..2364484
Molecular Weight (calculated)
64289.1 Da
IEP (calculated)
4.976
GRAVY (calculated)
-0.437
Length
573 amino acids
Sequence
(BLAST)
(BLAST)
001: MESSPASETD SLGEEVQSQI RGGKIKRKLE EFNWDHSFVK ELPGDPRSDV ISRKVFHACY SKVSPSVQVD DPQLVAWSDS VAELLDLHPK EFERLDFPLL
101: LSGAKPLPGA MPYAQCYGGH QFGRWAGQLG DGRAITLGEV LNSKGERWEL QLKGAGRTPY SRFSDGLAVL RSSIREFLCS EAMHCLGIPT TRALCLLTTG
201: QGVIRDMFYD GNAKEEPGAI VCRVSQSFLR FGSYQIHASR GEEDLEIVGK LADYAIRDHF PCIEKSMNRS DGLSFKTGDD DDDSVVDLTS NKYAAWVVEV
301: AERTATLFAR WQGVGFTHGV LNTDNMSILG QTIDYGPFGF LDAFDPSYTP NTTDLPGRRY CFANQPDIGL WNIAQFAEAL AAAQLVNEKE ANYAMERYGD
401: KFMDEYEAIM TKKLGLSKYN KEMISKLLNN MAVDKVDYTN FFRLLSNVKA DPNTPEDELL KPLKAAVLDI GKERKEEWIK WVRGYIHEVS GGDTPSDEER
501: KARMDSVNPK YILRNYLCQS AIDAAEQGDF SEVNNLLRLM KRPYEEQPGM EKYARLPPAW AYRPGVCMLS CSS
101: LSGAKPLPGA MPYAQCYGGH QFGRWAGQLG DGRAITLGEV LNSKGERWEL QLKGAGRTPY SRFSDGLAVL RSSIREFLCS EAMHCLGIPT TRALCLLTTG
201: QGVIRDMFYD GNAKEEPGAI VCRVSQSFLR FGSYQIHASR GEEDLEIVGK LADYAIRDHF PCIEKSMNRS DGLSFKTGDD DDDSVVDLTS NKYAAWVVEV
301: AERTATLFAR WQGVGFTHGV LNTDNMSILG QTIDYGPFGF LDAFDPSYTP NTTDLPGRRY CFANQPDIGL WNIAQFAEAL AAAQLVNEKE ANYAMERYGD
401: KFMDEYEAIM TKKLGLSKYN KEMISKLLNN MAVDKVDYTN FFRLLSNVKA DPNTPEDELL KPLKAAVLDI GKERKEEWIK WVRGYIHEVS GGDTPSDEER
501: KARMDSVNPK YILRNYLCQS AIDAAEQGDF SEVNNLLRLM KRPYEEQPGM EKYARLPPAW AYRPGVCMLS CSS
001: MLLRVCCPSS FFYLRPLHLF SSTAKVPFCP SLPRQFRLSP SRSSSFRRME SSPASSSSPT PVTDSSADSL AKDLQNQSLG AVDEGVKIKK KLEDFNWDHS
101: FVKELPGDPR TDVISREVLH ACYSKVSPSV EVDDPQLVAW SVSVAELLDL DPKEFERPDF PLMLSGAKPL PGAMSYAQCY GGHQFGMWAG QLGDGRAITL
201: GEVLNSKGER WELQLKGAGR TPYSRFADGL AVLRSSIREF LCSETMHCLG IPTTRALCLL TTGQNVTRDM FYDGNPKEEP GAIVCRVSQS FLRFGSYQIH
301: ASRGKEDLDI VRKLADYAIK HHFPHIESMD RSDSLSFKTG DEDDSVVDLT SNKYAAWIVE IAERTATLVA RWQGVGFTHG VLNTDNMSIL GQTIDYGPFG
401: FLDAFDPSYT PNTTDLPGRR YCFANQPDIG LWNIAQFSKT LAVAQLINQK EANYAMERYG DKFMDEYQAI MSKKLGLTKY NKEVISKLLN NMSVDKVDYT
501: NFFRLLANVK ANPNTPENEL LKPLKAVLLD IGKERKEAWI KWMRSYIQEV GGSEVSDEER KARMDSVNPK YILRNYLCQS AIDAAEQGDF SEVNNLIRLM
601: KRPYEEQPGM EKYARLPPAW AYRPGVCMLS CSS
101: FVKELPGDPR TDVISREVLH ACYSKVSPSV EVDDPQLVAW SVSVAELLDL DPKEFERPDF PLMLSGAKPL PGAMSYAQCY GGHQFGMWAG QLGDGRAITL
201: GEVLNSKGER WELQLKGAGR TPYSRFADGL AVLRSSIREF LCSETMHCLG IPTTRALCLL TTGQNVTRDM FYDGNPKEEP GAIVCRVSQS FLRFGSYQIH
301: ASRGKEDLDI VRKLADYAIK HHFPHIESMD RSDSLSFKTG DEDDSVVDLT SNKYAAWIVE IAERTATLVA RWQGVGFTHG VLNTDNMSIL GQTIDYGPFG
401: FLDAFDPSYT PNTTDLPGRR YCFANQPDIG LWNIAQFSKT LAVAQLINQK EANYAMERYG DKFMDEYQAI MSKKLGLTKY NKEVISKLLN NMSVDKVDYT
501: NFFRLLANVK ANPNTPENEL LKPLKAVLLD IGKERKEAWI KWMRSYIQEV GGSEVSDEER KARMDSVNPK YILRNYLCQS AIDAAEQGDF SEVNNLIRLM
601: KRPYEEQPGM EKYARLPPAW AYRPGVCMLS CSS
Arabidopsis Description
Selenoprotein O [Source:UniProtKB/TrEMBL;Acc:Q8H126]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.