Factsheet for GSMUA_Achr7P06390_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P11720_001	Banana	cytosol	86.32	81.93
HORVU7Hr1G046290.3	Barley	cytosol	76.34	76.34
VIT_06s0004g01360.t01	Wine grape	cytosol	80.41	75.52
PGSC0003DMT400082019	Potato	cytosol	77.26	72.82
Solyc01g006490.2.1	Tomato	cytosol	76.89	72.47
Bra006176.1-P	Field mustard	cytosol	73.94	69.81
KRG93074	Soybean	nucleus	75.97	69.66
TraesCS7A01G227000.1	Wheat	mitochondrion	77.63	67.96
TraesCS7D01G227400.2	Wheat	mitochondrion	77.45	67.8
TraesCS7B01G192600.1	Wheat	mitochondrion	77.45	67.8
Os06t0320700-01	Rice	plasma membrane	77.63	67.09
Zm00001d045897_P003	Maize	plastid	78.37	65.84
CDX78502	Canola	plastid	74.12	64.68
AT5G13030.1	Thale cress	plastid	75.42	64.45
Solyc12g100200.1.1	Tomato	plastid	73.57	64.4
CDX97219	Canola	plastid	75.05	63.64
CDX70490	Canola	plastid	74.49	63.56
CDX69676	Canola	plastid	74.68	62.93
Bra008862.1-P	Field mustard	plastid	74.49	62.77
OQU76338	Sorghum	mitochondrion	71.35	57.19

Protein Annotations

EnsemblPlants:GSMUA_Achr7P06390_001	EnsemblPlants:GSMUA_Achr7T06390_001	EnsemblPlantsGene:GSMUA_Achr7G06390_001	HAMAP:MF_00692	InterPro:UPF0061	PANTHER:PTHR32057
PFAM:PF02696	SEG:seg	UniParc:UPI0002950E8C	UniProt:M0TF79	MapMan:35.2	:

Description

UPF0061 protein azo1574 [Source:GMGC_GENE;Acc:GSMUA_Achr7G06390_001]

Coordinates

chr7:-:4698938..4703146

Molecular Weight (calculated)

60786.9 Da

IEP (calculated)

5.112

GRAVY (calculated)

-0.386

Length

541 amino acids

Sequence
(BLAST)

001: MESKTEARVP GADGSKRGRL KLEALNWDHS FVRELPGDPR TDTIPRQVLH ACYSRVSPSA EVENPELVAW SESVAELLDL DQKEFMRPDF PIIFAGALPL
101: KEGLPYAQCY GGHQFGRWAG QLGDGRAITL GEILNSQDER WELQLKGAGK TPYSRFADGL AVLRSSIREF LCSEAMNGLG IPTTRALCLV TTGKFVTRDM
201: FYDGNPRDEP GAIVCRVAQS FLRFGSYQIH ASRGKEDLDI VRTLADYTIR HHFPQIGTMK KSDKLSLEVG VEGSSVVDLT SNKYAAWSVE VAERTASLIA
301: SWQGVGFTHG VLNTDNMSVL GLTIDYGPFG FLDAFDPRYT PNTTDLPWRR YCFANQPDIG LWNIGQFTAT LSAAQLINNE EANYAMERYA NKFMDEYQSI
401: MTRKLGLSKY SQQLISDLLN NMATDKVDYT NFFRLLSNIN QERKEAWSSW VKTYIEELVS NGILDEGRKA AMDSVNPKYV LRNYLCQSAI DAAEQGDYSE
501: VRRLLKLVED PYDEQPRMEK YAGLPPEWSS RPGVCMLSCS S

Best Arabidopsis Sequence Match ( AT5G13030.1 )
(BLAST)

001: MLLRVCCPSS FFYLRPLHLF SSTAKVPFCP SLPRQFRLSP SRSSSFRRME SSPASSSSPT PVTDSSADSL AKDLQNQSLG AVDEGVKIKK KLEDFNWDHS
101: FVKELPGDPR TDVISREVLH ACYSKVSPSV EVDDPQLVAW SVSVAELLDL DPKEFERPDF PLMLSGAKPL PGAMSYAQCY GGHQFGMWAG QLGDGRAITL
201: GEVLNSKGER WELQLKGAGR TPYSRFADGL AVLRSSIREF LCSETMHCLG IPTTRALCLL TTGQNVTRDM FYDGNPKEEP GAIVCRVSQS FLRFGSYQIH
301: ASRGKEDLDI VRKLADYAIK HHFPHIESMD RSDSLSFKTG DEDDSVVDLT SNKYAAWIVE IAERTATLVA RWQGVGFTHG VLNTDNMSIL GQTIDYGPFG
401: FLDAFDPSYT PNTTDLPGRR YCFANQPDIG LWNIAQFSKT LAVAQLINQK EANYAMERYG DKFMDEYQAI MSKKLGLTKY NKEVISKLLN NMSVDKVDYT
501: NFFRLLANVK ANPNTPENEL LKPLKAVLLD IGKERKEAWI KWMRSYIQEV GGSEVSDEER KARMDSVNPK YILRNYLCQS AIDAAEQGDF SEVNNLIRLM
601: KRPYEEQPGM EKYARLPPAW AYRPGVCMLS CSS

Arabidopsis Description

Selenoprotein O [Source:UniProtKB/TrEMBL;Acc:Q8H126]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.