Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G227000.1 | Wheat | mitochondrion | 98.34 | 86.08 |
| TraesCS7D01G227400.2 | Wheat | mitochondrion | 98.15 | 85.92 |
| TraesCS7B01G192600.1 | Wheat | mitochondrion | 98.15 | 85.92 |
| Os06t0320700-01 | Rice | plasma membrane | 92.98 | 80.35 |
| GSMUA_Achr3P11720_001 | Banana | cytosol | 83.73 | 79.47 |
| VIT_06s0004g01360.t01 | Wine grape | cytosol | 82.26 | 77.26 |
| GSMUA_Achr7P06390_001 | Banana | cytosol | 76.34 | 76.34 |
| Zm00001d045897_P003 | Maize | plastid | 90.39 | 75.93 |
| Solyc01g006490.2.1 | Tomato | cytosol | 79.67 | 75.09 |
| PGSC0003DMT400082019 | Potato | cytosol | 79.48 | 74.91 |
| Bra006176.1-P | Field mustard | cytosol | 77.45 | 73.12 |
| KRG93074 | Soybean | nucleus | 79.11 | 72.54 |
| Solyc12g100200.1.1 | Tomato | plastid | 77.63 | 67.96 |
| OQU76338 | Sorghum | mitochondrion | 84.29 | 67.56 |
| CDX78502 | Canola | plastid | 77.08 | 67.26 |
| CDX97219 | Canola | plastid | 78.37 | 66.46 |
| CDX69676 | Canola | plastid | 78.74 | 66.36 |
| Bra008862.1-P | Field mustard | plastid | 78.37 | 66.04 |
| CDX70490 | Canola | plastid | 77.08 | 65.77 |
| AT5G13030.1 | Thale cress | plastid | 76.53 | 65.4 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G046290.3 | EnsemblPlantsGene:HORVU7Hr1G046290 | HAMAP:MF_00692 | InterPro:UPF0061 | PANTHER:PTHR32057 | PFAM:PF02696 |
| UniParc:UPI000B475875 | UniProt:A0A287WBY0 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chrchr7H:+:150238936..150246902
Molecular Weight (calculated)
60667.0 Da
IEP (calculated)
5.422
GRAVY (calculated)
-0.325
Length
541 amino acids
Sequence
(BLAST)
(BLAST)
001: EELSWDETFV RELPGDPRSD NIPRQVLHAC YTKVSPSAPV ENPKLVAWSQ SAADLLDLDH KEFERPDFPR FFSGETPLVG SVPYAQCYGG HQFGSWAGQL
101: GDGRAITLGE VLNSRGERWE LQLKGAGKTP YSRFADGLAV LRSSIREFLC SEAMHGLGIP TTRALCLVET GKSVVRDMFY DGNAKEEPGA IVCRLAPSFL
201: RFGSYQIHAT RGKEDLEIVR RLADYAIRHH YPHLENIKKS EGLSFEAAIG DSPAIDLTSN KYAAWAVEVA ERTAYLIARW QGVGFTHGVL NTDNMSVLGL
301: TIDYGPFGFL DAFDPSFTPN TTDLPGKRYC FANQPDVGLW NIAQFTGPLS AADLISKDEA NYVMERYGTK FMDEYQSIMT KKLGLSKYNK QLISKLLNNL
401: AVDKVDYTNF FRLLSNVKAD RDIPETELLV PIKAALLDIG KERKEAWISW VQTYIEELVA SGVSDEERKA AMNRVNPKYV LRNYLCQTAI DAADLGDYEE
501: VRRLLKVMEH PYDEQPGMEK YARLPPAWAY RPGVCMLSCS S
101: GDGRAITLGE VLNSRGERWE LQLKGAGKTP YSRFADGLAV LRSSIREFLC SEAMHGLGIP TTRALCLVET GKSVVRDMFY DGNAKEEPGA IVCRLAPSFL
201: RFGSYQIHAT RGKEDLEIVR RLADYAIRHH YPHLENIKKS EGLSFEAAIG DSPAIDLTSN KYAAWAVEVA ERTAYLIARW QGVGFTHGVL NTDNMSVLGL
301: TIDYGPFGFL DAFDPSFTPN TTDLPGKRYC FANQPDVGLW NIAQFTGPLS AADLISKDEA NYVMERYGTK FMDEYQSIMT KKLGLSKYNK QLISKLLNNL
401: AVDKVDYTNF FRLLSNVKAD RDIPETELLV PIKAALLDIG KERKEAWISW VQTYIEELVA SGVSDEERKA AMNRVNPKYV LRNYLCQTAI DAADLGDYEE
501: VRRLLKVMEH PYDEQPGMEK YARLPPAWAY RPGVCMLSCS S
001: MLLRVCCPSS FFYLRPLHLF SSTAKVPFCP SLPRQFRLSP SRSSSFRRME SSPASSSSPT PVTDSSADSL AKDLQNQSLG AVDEGVKIKK KLEDFNWDHS
101: FVKELPGDPR TDVISREVLH ACYSKVSPSV EVDDPQLVAW SVSVAELLDL DPKEFERPDF PLMLSGAKPL PGAMSYAQCY GGHQFGMWAG QLGDGRAITL
201: GEVLNSKGER WELQLKGAGR TPYSRFADGL AVLRSSIREF LCSETMHCLG IPTTRALCLL TTGQNVTRDM FYDGNPKEEP GAIVCRVSQS FLRFGSYQIH
301: ASRGKEDLDI VRKLADYAIK HHFPHIESMD RSDSLSFKTG DEDDSVVDLT SNKYAAWIVE IAERTATLVA RWQGVGFTHG VLNTDNMSIL GQTIDYGPFG
401: FLDAFDPSYT PNTTDLPGRR YCFANQPDIG LWNIAQFSKT LAVAQLINQK EANYAMERYG DKFMDEYQAI MSKKLGLTKY NKEVISKLLN NMSVDKVDYT
501: NFFRLLANVK ANPNTPENEL LKPLKAVLLD IGKERKEAWI KWMRSYIQEV GGSEVSDEER KARMDSVNPK YILRNYLCQS AIDAAEQGDF SEVNNLIRLM
601: KRPYEEQPGM EKYARLPPAW AYRPGVCMLS CSS
101: FVKELPGDPR TDVISREVLH ACYSKVSPSV EVDDPQLVAW SVSVAELLDL DPKEFERPDF PLMLSGAKPL PGAMSYAQCY GGHQFGMWAG QLGDGRAITL
201: GEVLNSKGER WELQLKGAGR TPYSRFADGL AVLRSSIREF LCSETMHCLG IPTTRALCLL TTGQNVTRDM FYDGNPKEEP GAIVCRVSQS FLRFGSYQIH
301: ASRGKEDLDI VRKLADYAIK HHFPHIESMD RSDSLSFKTG DEDDSVVDLT SNKYAAWIVE IAERTATLVA RWQGVGFTHG VLNTDNMSIL GQTIDYGPFG
401: FLDAFDPSYT PNTTDLPGRR YCFANQPDIG LWNIAQFSKT LAVAQLINQK EANYAMERYG DKFMDEYQAI MSKKLGLTKY NKEVISKLLN NMSVDKVDYT
501: NFFRLLANVK ANPNTPENEL LKPLKAVLLD IGKERKEAWI KWMRSYIQEV GGSEVSDEER KARMDSVNPK YILRNYLCQS AIDAAEQGDF SEVNNLIRLM
601: KRPYEEQPGM EKYARLPPAW AYRPGVCMLS CSS
Arabidopsis Description
Selenoprotein O [Source:UniProtKB/TrEMBL;Acc:Q8H126]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.