Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006176.1-P | Field mustard | cytosol | 88.71 | 95.99 |
| CDX70490 | Canola | plastid | 92.42 | 90.38 |
| CDX97219 | Canola | plastid | 84.84 | 82.45 |
| AT5G13030.1 | Thale cress | plastid | 84.03 | 82.31 |
| CDX69676 | Canola | plastid | 84.84 | 81.93 |
| VIT_06s0004g01360.t01 | Wine grape | cytosol | 71.61 | 77.08 |
| HORVU7Hr1G046290.3 | Barley | cytosol | 67.26 | 77.08 |
| GSMUA_Achr3P11720_001 | Banana | cytosol | 70.81 | 77.02 |
| PGSC0003DMT400082019 | Potato | cytosol | 70.32 | 75.96 |
| Solyc01g006490.2.1 | Tomato | cytosol | 70.16 | 75.78 |
| GSMUA_Achr7P06390_001 | Banana | cytosol | 64.68 | 74.12 |
| KRG93074 | Soybean | nucleus | 69.52 | 73.05 |
| TraesCS7A01G227000.1 | Wheat | mitochondrion | 68.87 | 69.09 |
| TraesCS7B01G192600.1 | Wheat | mitochondrion | 68.71 | 68.93 |
| TraesCS7D01G227400.2 | Wheat | mitochondrion | 68.71 | 68.93 |
| Os06t0320700-01 | Rice | plasma membrane | 68.71 | 68.05 |
| Solyc12g100200.1.1 | Tomato | plastid | 67.74 | 67.96 |
| Zm00001d045897_P003 | Maize | plastid | 69.84 | 67.24 |
| OQU76338 | Sorghum | mitochondrion | 63.87 | 58.67 |
Protein Annotations
| EnsemblPlants:CDX78502 | EnsemblPlantsGene:GSBRNA2T00129902001 | HAMAP:MF_00692 | InterPro:UPF0061 | PANTHER:PTHR32057 | PFAM:PF02696 |
| ProteinID:CDX78502 | ProteinID:CDX78502.1 | SEG:seg | UniParc:UPI0004EEFEC1 | MapMan:35.2 | : |
Description
BnaA03g04140D
Coordinates
chrLK031815:+:1035733..1039116
Molecular Weight (calculated)
69826.7 Da
IEP (calculated)
5.459
GRAVY (calculated)
-0.415
Length
620 amino acids
Sequence
(BLAST)
(BLAST)
001: MMLRVCPSSL FNLRPLHLST SSTEFPFCPS IRRELRLVPS RSSSSSFRRM ESSPASETDS LGEDMQNQTD EGDKIKRKLE EFNWDHSFVN ELPGDPRSDV
101: ISRKVFHACY SKVSPSVQVD DPQLVAWSDS VAELLDLHPK EFERLDFPLL LSGAKPLPGA MPYAQCYGGH QFGRWAGQLG DGRAITLGEV LNSKGERWEL
201: QLKGAGRTPY SRFSDGLAVL RSSIREFLCS EAMHCLGIPT TRALCLLTTG QGVIRDMFYD GNAKEEPGAI VCRVSQSFLR FGSYQIHASR GEEDLEIVGK
301: LADYAIRHHF PCIEMSMNRS DSLSFKTGDD SVVDLTSNKY AAWVVEVAER TATLFARWQG VGFTHGVLNT DNMSILGQTI DYGPFGFLDT FDPSYTPNTT
401: DLPGRRYCFA NQPDIGLWNI AQFAEALAAA QLINEKEANY AMERYGDKFM DEYEAIMTKK LGLSKYNKEM ISKLLNNMAV DKVDYTNFFR LLSNVKANPS
501: TSDDELLNPL KAALLDIGKE RKEEWIRWVR GYIHEVSGGD TSSDEERKAR MDSVNPKYIL RNYLCQSAID AAEQGDFSEV NNLLRLMKRP YEEQPGMEKY
601: ARLPPAWAYR PGVCMLSCSS
101: ISRKVFHACY SKVSPSVQVD DPQLVAWSDS VAELLDLHPK EFERLDFPLL LSGAKPLPGA MPYAQCYGGH QFGRWAGQLG DGRAITLGEV LNSKGERWEL
201: QLKGAGRTPY SRFSDGLAVL RSSIREFLCS EAMHCLGIPT TRALCLLTTG QGVIRDMFYD GNAKEEPGAI VCRVSQSFLR FGSYQIHASR GEEDLEIVGK
301: LADYAIRHHF PCIEMSMNRS DSLSFKTGDD SVVDLTSNKY AAWVVEVAER TATLFARWQG VGFTHGVLNT DNMSILGQTI DYGPFGFLDT FDPSYTPNTT
401: DLPGRRYCFA NQPDIGLWNI AQFAEALAAA QLINEKEANY AMERYGDKFM DEYEAIMTKK LGLSKYNKEM ISKLLNNMAV DKVDYTNFFR LLSNVKANPS
501: TSDDELLNPL KAALLDIGKE RKEEWIRWVR GYIHEVSGGD TSSDEERKAR MDSVNPKYIL RNYLCQSAID AAEQGDFSEV NNLLRLMKRP YEEQPGMEKY
601: ARLPPAWAYR PGVCMLSCSS
001: MLLRVCCPSS FFYLRPLHLF SSTAKVPFCP SLPRQFRLSP SRSSSFRRME SSPASSSSPT PVTDSSADSL AKDLQNQSLG AVDEGVKIKK KLEDFNWDHS
101: FVKELPGDPR TDVISREVLH ACYSKVSPSV EVDDPQLVAW SVSVAELLDL DPKEFERPDF PLMLSGAKPL PGAMSYAQCY GGHQFGMWAG QLGDGRAITL
201: GEVLNSKGER WELQLKGAGR TPYSRFADGL AVLRSSIREF LCSETMHCLG IPTTRALCLL TTGQNVTRDM FYDGNPKEEP GAIVCRVSQS FLRFGSYQIH
301: ASRGKEDLDI VRKLADYAIK HHFPHIESMD RSDSLSFKTG DEDDSVVDLT SNKYAAWIVE IAERTATLVA RWQGVGFTHG VLNTDNMSIL GQTIDYGPFG
401: FLDAFDPSYT PNTTDLPGRR YCFANQPDIG LWNIAQFSKT LAVAQLINQK EANYAMERYG DKFMDEYQAI MSKKLGLTKY NKEVISKLLN NMSVDKVDYT
501: NFFRLLANVK ANPNTPENEL LKPLKAVLLD IGKERKEAWI KWMRSYIQEV GGSEVSDEER KARMDSVNPK YILRNYLCQS AIDAAEQGDF SEVNNLIRLM
601: KRPYEEQPGM EKYARLPPAW AYRPGVCMLS CSS
101: FVKELPGDPR TDVISREVLH ACYSKVSPSV EVDDPQLVAW SVSVAELLDL DPKEFERPDF PLMLSGAKPL PGAMSYAQCY GGHQFGMWAG QLGDGRAITL
201: GEVLNSKGER WELQLKGAGR TPYSRFADGL AVLRSSIREF LCSETMHCLG IPTTRALCLL TTGQNVTRDM FYDGNPKEEP GAIVCRVSQS FLRFGSYQIH
301: ASRGKEDLDI VRKLADYAIK HHFPHIESMD RSDSLSFKTG DEDDSVVDLT SNKYAAWIVE IAERTATLVA RWQGVGFTHG VLNTDNMSIL GQTIDYGPFG
401: FLDAFDPSYT PNTTDLPGRR YCFANQPDIG LWNIAQFSKT LAVAQLINQK EANYAMERYG DKFMDEYQAI MSKKLGLTKY NKEVISKLLN NMSVDKVDYT
501: NFFRLLANVK ANPNTPENEL LKPLKAVLLD IGKERKEAWI KWMRSYIQEV GGSEVSDEER KARMDSVNPK YILRNYLCQS AIDAAEQGDF SEVNNLIRLM
601: KRPYEEQPGM EKYARLPPAW AYRPGVCMLS CSS
Arabidopsis Description
Selenoprotein O [Source:UniProtKB/TrEMBL;Acc:Q8H126]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.