Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G192600.1 | Wheat | mitochondrion | 99.03 | 99.03 |
| TraesCS7D01G227400.2 | Wheat | mitochondrion | 98.87 | 98.87 |
| HORVU7Hr1G046290.3 | Barley | cytosol | 86.08 | 98.34 |
| Os06t0320700-01 | Rice | plasma membrane | 84.47 | 83.39 |
| GSMUA_Achr3P11720_001 | Banana | cytosol | 74.43 | 80.7 |
| Zm00001d045897_P003 | Maize | plastid | 83.01 | 79.66 |
| VIT_06s0004g01360.t01 | Wine grape | cytosol | 72.65 | 77.95 |
| GSMUA_Achr7P06390_001 | Banana | cytosol | 67.96 | 77.63 |
| Solyc01g006490.2.1 | Tomato | cytosol | 70.55 | 75.96 |
| PGSC0003DMT400082019 | Potato | cytosol | 70.55 | 75.96 |
| Bra006176.1-P | Field mustard | cytosol | 68.28 | 73.65 |
| KRG93074 | Soybean | nucleus | 69.9 | 73.22 |
| Solyc12g100200.1.1 | Tomato | plastid | 69.58 | 69.58 |
| CDX78502 | Canola | plastid | 69.09 | 68.87 |
| OQU76338 | Sorghum | mitochondrion | 74.76 | 68.44 |
| CDX97219 | Canola | plastid | 70.23 | 68.03 |
| CDX69676 | Canola | plastid | 70.23 | 67.6 |
| Bra008862.1-P | Field mustard | plastid | 70.06 | 67.45 |
| CDX70490 | Canola | plastid | 69.09 | 67.35 |
| AT5G13030.1 | Thale cress | plastid | 68.12 | 66.51 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G227000.1 | EnsemblPlantsGene:TraesCS7A01G227000 | HAMAP:MF_00692 | InterPro:UPF0061 | PANTHER:PTHR32057 | PFAM:PF02696 |
| SEG:seg | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr7A:+:197289032..197296403
Molecular Weight (calculated)
69079.5 Da
IEP (calculated)
7.112
GRAVY (calculated)
-0.328
Length
618 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPQLRFPTV LPNLYPHLLL PRSLPSRRLR LPPPPTPRHP LRRLLFRGMA SSATGEAAPA AGTSGAGEAS ARPRRALEEL AWDETFVREL PGDPRSDNIP
101: RQVLHACYTK VSPSAPVENP KLVAWSESVA DLLDLDHKEF ERPDFPRFFS GETPLVGSVP YAQCYGGHQF GSWAGQLGDG RAITLGEVLN SRGERWELQL
201: KGAGKTPYSR FADGLAVLRS SVREFLCSEA MHGLGIPTTR ALCLVETGKS VVRDMFYDGN AKEEPGAIVC RVAPSFLRFG SYQLHATRGK EDLEIVRRLA
301: DYTIRHHYPH LENIKKSEGL SFEAAIGDSP AIDLTSNKYA AWAVEVAERT AYLIARWQGV GFTHGVLNTD NMSVLGLTID YGPFGFLDAF DPSFTPNTTD
401: LPGKRYCFAN QPDVGLWNIA QFTGPLSAAY LISKDEANYV MERYGTKFMD EYQSIMTKKL GLSKYNKQLI SKLLNNLAVD KVDYTNFFRL LSNVKADRDI
501: PETELLVPIK AALLDIGKER KEAWISWVQT YIEELVASGV SDEERKATMN RVNPKYVLRN YLCQTAIDAA DLGDYEEVRR LLKVMEHPYD EQPGMEKYAR
601: LPPAWAYRPG VCMLSCSS
101: RQVLHACYTK VSPSAPVENP KLVAWSESVA DLLDLDHKEF ERPDFPRFFS GETPLVGSVP YAQCYGGHQF GSWAGQLGDG RAITLGEVLN SRGERWELQL
201: KGAGKTPYSR FADGLAVLRS SVREFLCSEA MHGLGIPTTR ALCLVETGKS VVRDMFYDGN AKEEPGAIVC RVAPSFLRFG SYQLHATRGK EDLEIVRRLA
301: DYTIRHHYPH LENIKKSEGL SFEAAIGDSP AIDLTSNKYA AWAVEVAERT AYLIARWQGV GFTHGVLNTD NMSVLGLTID YGPFGFLDAF DPSFTPNTTD
401: LPGKRYCFAN QPDVGLWNIA QFTGPLSAAY LISKDEANYV MERYGTKFMD EYQSIMTKKL GLSKYNKQLI SKLLNNLAVD KVDYTNFFRL LSNVKADRDI
501: PETELLVPIK AALLDIGKER KEAWISWVQT YIEELVASGV SDEERKATMN RVNPKYVLRN YLCQTAIDAA DLGDYEEVRR LLKVMEHPYD EQPGMEKYAR
601: LPPAWAYRPG VCMLSCSS
001: MLLRVCCPSS FFYLRPLHLF SSTAKVPFCP SLPRQFRLSP SRSSSFRRME SSPASSSSPT PVTDSSADSL AKDLQNQSLG AVDEGVKIKK KLEDFNWDHS
101: FVKELPGDPR TDVISREVLH ACYSKVSPSV EVDDPQLVAW SVSVAELLDL DPKEFERPDF PLMLSGAKPL PGAMSYAQCY GGHQFGMWAG QLGDGRAITL
201: GEVLNSKGER WELQLKGAGR TPYSRFADGL AVLRSSIREF LCSETMHCLG IPTTRALCLL TTGQNVTRDM FYDGNPKEEP GAIVCRVSQS FLRFGSYQIH
301: ASRGKEDLDI VRKLADYAIK HHFPHIESMD RSDSLSFKTG DEDDSVVDLT SNKYAAWIVE IAERTATLVA RWQGVGFTHG VLNTDNMSIL GQTIDYGPFG
401: FLDAFDPSYT PNTTDLPGRR YCFANQPDIG LWNIAQFSKT LAVAQLINQK EANYAMERYG DKFMDEYQAI MSKKLGLTKY NKEVISKLLN NMSVDKVDYT
501: NFFRLLANVK ANPNTPENEL LKPLKAVLLD IGKERKEAWI KWMRSYIQEV GGSEVSDEER KARMDSVNPK YILRNYLCQS AIDAAEQGDF SEVNNLIRLM
601: KRPYEEQPGM EKYARLPPAW AYRPGVCMLS CSS
101: FVKELPGDPR TDVISREVLH ACYSKVSPSV EVDDPQLVAW SVSVAELLDL DPKEFERPDF PLMLSGAKPL PGAMSYAQCY GGHQFGMWAG QLGDGRAITL
201: GEVLNSKGER WELQLKGAGR TPYSRFADGL AVLRSSIREF LCSETMHCLG IPTTRALCLL TTGQNVTRDM FYDGNPKEEP GAIVCRVSQS FLRFGSYQIH
301: ASRGKEDLDI VRKLADYAIK HHFPHIESMD RSDSLSFKTG DEDDSVVDLT SNKYAAWIVE IAERTATLVA RWQGVGFTHG VLNTDNMSIL GQTIDYGPFG
401: FLDAFDPSYT PNTTDLPGRR YCFANQPDIG LWNIAQFSKT LAVAQLINQK EANYAMERYG DKFMDEYQAI MSKKLGLTKY NKEVISKLLN NMSVDKVDYT
501: NFFRLLANVK ANPNTPENEL LKPLKAVLLD IGKERKEAWI KWMRSYIQEV GGSEVSDEER KARMDSVNPK YILRNYLCQS AIDAAEQGDF SEVNNLIRLM
601: KRPYEEQPGM EKYARLPPAW AYRPGVCMLS CSS
Arabidopsis Description
Selenoprotein O [Source:UniProtKB/TrEMBL;Acc:Q8H126]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.