Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra008862.1-P | Field mustard | plastid | 99.38 | 99.38 |
| CDX97219 | Canola | plastid | 93.46 | 94.04 |
| AT5G13030.1 | Thale cress | plastid | 87.07 | 88.31 |
| CDX70490 | Canola | plastid | 83.8 | 84.86 |
| CDX78502 | Canola | plastid | 81.93 | 84.84 |
| VIT_06s0004g01360.t01 | Wine grape | cytosol | 71.03 | 79.17 |
| HORVU7Hr1G046290.3 | Barley | cytosol | 66.36 | 78.74 |
| GSMUA_Achr3P11720_001 | Banana | cytosol | 69.47 | 78.25 |
| Solyc01g006490.2.1 | Tomato | cytosol | 69.63 | 77.87 |
| PGSC0003DMT400082019 | Potato | cytosol | 69.47 | 77.7 |
| KRG93074 | Soybean | nucleus | 69.0 | 75.08 |
| GSMUA_Achr7P06390_001 | Banana | cytosol | 62.93 | 74.68 |
| Solyc12g100200.1.1 | Tomato | plastid | 67.76 | 70.39 |
| TraesCS7D01G227400.2 | Wheat | mitochondrion | 67.76 | 70.39 |
| TraesCS7A01G227000.1 | Wheat | mitochondrion | 67.6 | 70.23 |
| Os06t0320700-01 | Rice | plasma membrane | 68.22 | 69.97 |
| TraesCS7B01G192600.1 | Wheat | mitochondrion | 67.29 | 69.9 |
| Zm00001d045897_P003 | Maize | plastid | 69.31 | 69.1 |
| OQU76338 | Sorghum | mitochondrion | 63.55 | 60.44 |
Protein Annotations
| EnsemblPlants:CDX69676 | EnsemblPlantsGene:GSBRNA2T00135704001 | HAMAP:MF_00692 | InterPro:UPF0061 | PANTHER:PTHR32057 | PFAM:PF02696 |
| ProteinID:CDX69676 | ProteinID:CDX69676.1 | SEG:seg | UniParc:UPI0004EE4003 | MapMan:35.2 | : |
Description
BnaA10g20250D
Coordinates
chrLK031790:-:1303209..1306232
Molecular Weight (calculated)
71780.0 Da
IEP (calculated)
5.873
GRAVY (calculated)
-0.401
Length
642 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLRVCSSPS SFFNLRPLHL FTSSPKLPFG RPSLRREFRL IPSRSSSSSS SFHRMESPPA SSSSQTPVTA SETDSLAKDL QNQNLGASVD EGGAKIKRKL
101: EDFNWDHSFV KELPGDPRSD VTSREVLHAC YSKVSPSVPV DDPQLVAWSD SVAELLELDP KEFERPDFPL LLSGAKPLPG SMPYAQCYGG HQFGMWAGQL
201: GDGRAITLGE VLNSKGERWE LQLKGAGKTP YSRFADGLAV LRSSIREFLC SEAMHFLGIP TTRALCLLTT GQDVTRDMFY DGNPKEEPGA IVCRVSQSFL
301: RFGSYQIHAS RGEEDLEIVR KLADYAIKHH FPHIESMNRS DDSLSFITGK EDDSVVDLTS NKYAAWVVEI AERTATLVAR WQGVGFTHGV LNTDNMSILG
401: QTIDYGPFGF LDAFDPSFTP NTTDLPGRRY CFANQPDIGL WNIAQFAKSL AVADLINQKE ANYAMERYGE KFMDEYQAIM SKKLGLSKYN KEIISKLLNN
501: MAVDKVDYTN FFRLLSNVKA DPNTPEAELL KPLKAALLDI GKERKEAWIK WVQAYIQEVS GSDTSDEERK ARMDSVNPKY ILRNYLCQSA IDAAEQGDFS
601: EVNNLIRLMK NPYEDQPGME KYARLPPAWA YRPGVCMLSC SS
101: EDFNWDHSFV KELPGDPRSD VTSREVLHAC YSKVSPSVPV DDPQLVAWSD SVAELLELDP KEFERPDFPL LLSGAKPLPG SMPYAQCYGG HQFGMWAGQL
201: GDGRAITLGE VLNSKGERWE LQLKGAGKTP YSRFADGLAV LRSSIREFLC SEAMHFLGIP TTRALCLLTT GQDVTRDMFY DGNPKEEPGA IVCRVSQSFL
301: RFGSYQIHAS RGEEDLEIVR KLADYAIKHH FPHIESMNRS DDSLSFITGK EDDSVVDLTS NKYAAWVVEI AERTATLVAR WQGVGFTHGV LNTDNMSILG
401: QTIDYGPFGF LDAFDPSFTP NTTDLPGRRY CFANQPDIGL WNIAQFAKSL AVADLINQKE ANYAMERYGE KFMDEYQAIM SKKLGLSKYN KEIISKLLNN
501: MAVDKVDYTN FFRLLSNVKA DPNTPEAELL KPLKAALLDI GKERKEAWIK WVQAYIQEVS GSDTSDEERK ARMDSVNPKY ILRNYLCQSA IDAAEQGDFS
601: EVNNLIRLMK NPYEDQPGME KYARLPPAWA YRPGVCMLSC SS
001: MLLRVCCPSS FFYLRPLHLF SSTAKVPFCP SLPRQFRLSP SRSSSFRRME SSPASSSSPT PVTDSSADSL AKDLQNQSLG AVDEGVKIKK KLEDFNWDHS
101: FVKELPGDPR TDVISREVLH ACYSKVSPSV EVDDPQLVAW SVSVAELLDL DPKEFERPDF PLMLSGAKPL PGAMSYAQCY GGHQFGMWAG QLGDGRAITL
201: GEVLNSKGER WELQLKGAGR TPYSRFADGL AVLRSSIREF LCSETMHCLG IPTTRALCLL TTGQNVTRDM FYDGNPKEEP GAIVCRVSQS FLRFGSYQIH
301: ASRGKEDLDI VRKLADYAIK HHFPHIESMD RSDSLSFKTG DEDDSVVDLT SNKYAAWIVE IAERTATLVA RWQGVGFTHG VLNTDNMSIL GQTIDYGPFG
401: FLDAFDPSYT PNTTDLPGRR YCFANQPDIG LWNIAQFSKT LAVAQLINQK EANYAMERYG DKFMDEYQAI MSKKLGLTKY NKEVISKLLN NMSVDKVDYT
501: NFFRLLANVK ANPNTPENEL LKPLKAVLLD IGKERKEAWI KWMRSYIQEV GGSEVSDEER KARMDSVNPK YILRNYLCQS AIDAAEQGDF SEVNNLIRLM
601: KRPYEEQPGM EKYARLPPAW AYRPGVCMLS CSS
101: FVKELPGDPR TDVISREVLH ACYSKVSPSV EVDDPQLVAW SVSVAELLDL DPKEFERPDF PLMLSGAKPL PGAMSYAQCY GGHQFGMWAG QLGDGRAITL
201: GEVLNSKGER WELQLKGAGR TPYSRFADGL AVLRSSIREF LCSETMHCLG IPTTRALCLL TTGQNVTRDM FYDGNPKEEP GAIVCRVSQS FLRFGSYQIH
301: ASRGKEDLDI VRKLADYAIK HHFPHIESMD RSDSLSFKTG DEDDSVVDLT SNKYAAWIVE IAERTATLVA RWQGVGFTHG VLNTDNMSIL GQTIDYGPFG
401: FLDAFDPSYT PNTTDLPGRR YCFANQPDIG LWNIAQFSKT LAVAQLINQK EANYAMERYG DKFMDEYQAI MSKKLGLTKY NKEVISKLLN NMSVDKVDYT
501: NFFRLLANVK ANPNTPENEL LKPLKAVLLD IGKERKEAWI KWMRSYIQEV GGSEVSDEER KARMDSVNPK YILRNYLCQS AIDAAEQGDF SEVNNLIRLM
601: KRPYEEQPGM EKYARLPPAW AYRPGVCMLS CSS
Arabidopsis Description
Selenoprotein O [Source:UniProtKB/TrEMBL;Acc:Q8H126]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.