Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G046290.3 | Barley | cytosol | 67.56 | 84.29 |
| Zm00001d045897_P003 | Maize | plastid | 71.56 | 75.0 |
| TraesCS7A01G227000.1 | Wheat | mitochondrion | 68.44 | 74.76 |
| TraesCS7D01G227400.2 | Wheat | mitochondrion | 68.15 | 74.43 |
| TraesCS7B01G192600.1 | Wheat | mitochondrion | 68.15 | 74.43 |
| Os06t0320700-01 | Rice | plasma membrane | 68.74 | 74.12 |
| GSMUA_Achr3P11720_001 | Banana | cytosol | 62.52 | 74.04 |
| VIT_06s0004g01360.t01 | Wine grape | cytosol | 62.22 | 72.92 |
| GSMUA_Achr7P06390_001 | Banana | cytosol | 57.19 | 71.35 |
| Solyc01g006490.2.1 | Tomato | cytosol | 60.0 | 70.56 |
| PGSC0003DMT400082019 | Potato | cytosol | 59.56 | 70.03 |
| Bra006176.1-P | Field mustard | cytosol | 57.63 | 67.89 |
| KRG93074 | Soybean | nucleus | 58.67 | 67.12 |
| Solyc12g100200.1.1 | Tomato | plastid | 59.26 | 64.72 |
| CDX97219 | Canola | plastid | 60.59 | 64.11 |
| CDX78502 | Canola | plastid | 58.67 | 63.87 |
| Bra008862.1-P | Field mustard | plastid | 60.59 | 63.71 |
| CDX69676 | Canola | plastid | 60.44 | 63.55 |
| AT5G13030.1 | Thale cress | plastid | 59.41 | 63.35 |
| CDX70490 | Canola | plastid | 58.52 | 62.3 |
Protein Annotations
| EnsemblPlants:OQU76338 | EnsemblPlantsGene:SORBI_3010G132600 | HAMAP:MF_00692 | InterPro:UPF0061 | PANTHER:PTHR32057 | PFAM:PF02696 |
| ProteinID:OQU76338 | ProteinID:OQU76338.1 | SEG:seg | UniParc:UPI0009DC826C | UniProt:A0A1W0VST0 | MapMan:35.2 |
Description
hypothetical protein
Coordinates
chr10:-:18308321..18314385
Molecular Weight (calculated)
75421.3 Da
IEP (calculated)
8.588
GRAVY (calculated)
-0.357
Length
675 amino acids
Sequence
(BLAST)
(BLAST)
001: MCMGMKGNCK KYQHLQQFPN RTPNPHKTVI LGEMNKISWS SSSPIWPPFF GGHQKTPHLP SNRGGVASPQ KQWGPSNCHL LPSEDTLTNR APTAGTAAAV
101: WRRWRLGPPR HALACPRRAT VVLHLWPLLL HLRPPWLRTK LGTALAGAKD GGASWGWDDA SRGWAWLRPE LAVLEVEVPR RARPGGRGSS PCLTWQFERP
201: DFPQFFSGAT PLVGSLPYAQ CYGGHQFGVW AGQLGDGRAI TLGEVVNSRG ERWELQLKGC GKTPYSRFAD GLAVLRSSIR EFLCSEAMHG LGIPTTRALC
301: LVETGKSVVR DMFYDGNAKE EPGAIVCRVA PSFLRFGSYQ IHASRGKEDI EIVRRLADYM IRHHFPHLEN MKKSEGLSFE AAIGDSPTID LTSNKYAAWA
401: VEVAERTAYL IARWQGVGFT HGVLNTDNMS VLGLTIDYGP FGFLDAFDPS YTPNTTDLPG KRYCFANQPD VGLWNIAQFT GPLSSAELIS KDEANYVMER
501: YGTKFMDEYQ SIMTKKLGLT KYNKQLISKL LNNLAVDKVD YTNFFRLLSN VNADPGIPEN ELLVPLKAAL LDIGKERKEA WISWVQTYIE ELVESGIPDE
601: ERKAAMNSVN PKYVLRNYLC QSAIDAAEQG DYEEVRRLLK VMQNPYDEQP GMEKYARLPP AWAYRPGVCM LSCSS
101: WRRWRLGPPR HALACPRRAT VVLHLWPLLL HLRPPWLRTK LGTALAGAKD GGASWGWDDA SRGWAWLRPE LAVLEVEVPR RARPGGRGSS PCLTWQFERP
201: DFPQFFSGAT PLVGSLPYAQ CYGGHQFGVW AGQLGDGRAI TLGEVVNSRG ERWELQLKGC GKTPYSRFAD GLAVLRSSIR EFLCSEAMHG LGIPTTRALC
301: LVETGKSVVR DMFYDGNAKE EPGAIVCRVA PSFLRFGSYQ IHASRGKEDI EIVRRLADYM IRHHFPHLEN MKKSEGLSFE AAIGDSPTID LTSNKYAAWA
401: VEVAERTAYL IARWQGVGFT HGVLNTDNMS VLGLTIDYGP FGFLDAFDPS YTPNTTDLPG KRYCFANQPD VGLWNIAQFT GPLSSAELIS KDEANYVMER
501: YGTKFMDEYQ SIMTKKLGLT KYNKQLISKL LNNLAVDKVD YTNFFRLLSN VNADPGIPEN ELLVPLKAAL LDIGKERKEA WISWVQTYIE ELVESGIPDE
601: ERKAAMNSVN PKYVLRNYLC QSAIDAAEQG DYEEVRRLLK VMQNPYDEQP GMEKYARLPP AWAYRPGVCM LSCSS
001: MLLRVCCPSS FFYLRPLHLF SSTAKVPFCP SLPRQFRLSP SRSSSFRRME SSPASSSSPT PVTDSSADSL AKDLQNQSLG AVDEGVKIKK KLEDFNWDHS
101: FVKELPGDPR TDVISREVLH ACYSKVSPSV EVDDPQLVAW SVSVAELLDL DPKEFERPDF PLMLSGAKPL PGAMSYAQCY GGHQFGMWAG QLGDGRAITL
201: GEVLNSKGER WELQLKGAGR TPYSRFADGL AVLRSSIREF LCSETMHCLG IPTTRALCLL TTGQNVTRDM FYDGNPKEEP GAIVCRVSQS FLRFGSYQIH
301: ASRGKEDLDI VRKLADYAIK HHFPHIESMD RSDSLSFKTG DEDDSVVDLT SNKYAAWIVE IAERTATLVA RWQGVGFTHG VLNTDNMSIL GQTIDYGPFG
401: FLDAFDPSYT PNTTDLPGRR YCFANQPDIG LWNIAQFSKT LAVAQLINQK EANYAMERYG DKFMDEYQAI MSKKLGLTKY NKEVISKLLN NMSVDKVDYT
501: NFFRLLANVK ANPNTPENEL LKPLKAVLLD IGKERKEAWI KWMRSYIQEV GGSEVSDEER KARMDSVNPK YILRNYLCQS AIDAAEQGDF SEVNNLIRLM
601: KRPYEEQPGM EKYARLPPAW AYRPGVCMLS CSS
101: FVKELPGDPR TDVISREVLH ACYSKVSPSV EVDDPQLVAW SVSVAELLDL DPKEFERPDF PLMLSGAKPL PGAMSYAQCY GGHQFGMWAG QLGDGRAITL
201: GEVLNSKGER WELQLKGAGR TPYSRFADGL AVLRSSIREF LCSETMHCLG IPTTRALCLL TTGQNVTRDM FYDGNPKEEP GAIVCRVSQS FLRFGSYQIH
301: ASRGKEDLDI VRKLADYAIK HHFPHIESMD RSDSLSFKTG DEDDSVVDLT SNKYAAWIVE IAERTATLVA RWQGVGFTHG VLNTDNMSIL GQTIDYGPFG
401: FLDAFDPSYT PNTTDLPGRR YCFANQPDIG LWNIAQFSKT LAVAQLINQK EANYAMERYG DKFMDEYQAI MSKKLGLTKY NKEVISKLLN NMSVDKVDYT
501: NFFRLLANVK ANPNTPENEL LKPLKAVLLD IGKERKEAWI KWMRSYIQEV GGSEVSDEER KARMDSVNPK YILRNYLCQS AIDAAEQGDF SEVNNLIRLM
601: KRPYEEQPGM EKYARLPPAW AYRPGVCMLS CSS
Arabidopsis Description
Selenoprotein O [Source:UniProtKB/TrEMBL;Acc:Q8H126]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.