Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 1
- mitochondrion 5
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G046290.3 | Barley | cytosol | 72.54 | 79.11 |
| VIT_06s0004g01360.t01 | Wine grape | cytosol | 76.1 | 77.95 |
| PGSC0003DMT400082019 | Potato | cytosol | 75.08 | 77.18 |
| GSMUA_Achr3P11720_001 | Banana | cytosol | 74.41 | 77.02 |
| Solyc01g006490.2.1 | Tomato | cytosol | 74.58 | 76.66 |
| GSMUA_Achr7P06390_001 | Banana | cytosol | 69.66 | 75.97 |
| Bra006176.1-P | Field mustard | cytosol | 72.71 | 74.87 |
| TraesCS7A01G227000.1 | Wheat | mitochondrion | 73.22 | 69.9 |
| Os06t0320700-01 | Rice | plasma membrane | 74.07 | 69.81 |
| TraesCS7D01G227400.2 | Wheat | mitochondrion | 72.88 | 69.58 |
| CDX78502 | Canola | plastid | 73.05 | 69.52 |
| Solyc12g100200.1.1 | Tomato | plastid | 72.71 | 69.42 |
| TraesCS7B01G192600.1 | Wheat | mitochondrion | 72.54 | 69.26 |
| CDX69676 | Canola | plastid | 75.08 | 69.0 |
| AT5G13030.1 | Thale cress | plastid | 73.9 | 68.88 |
| Bra008862.1-P | Field mustard | plastid | 74.92 | 68.85 |
| CDX97219 | Canola | plastid | 74.41 | 68.81 |
| CDX70490 | Canola | plastid | 72.54 | 67.51 |
| Zm00001d045897_P003 | Maize | plastid | 73.39 | 67.24 |
| OQU76338 | Sorghum | mitochondrion | 67.12 | 58.67 |
Protein Annotations
| EMBL:ACUP02012779 | EnsemblPlants:KRG93074 | EnsemblPlantsGene:GLYMA_20G246800 | EntrezGene:100817183 | HAMAP:MF_00692 | InterPro:UPF0061 |
| PANTHER:PTHR32057 | PFAM:PF02696 | ProteinID:KRG93074 | ProteinID:KRG93074.1 | UniParc:UPI0001CAB3D1 | UniProt:I1NJC2 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr20:-:47663456..47667530
Molecular Weight (calculated)
66533.4 Da
IEP (calculated)
6.599
GRAVY (calculated)
-0.281
Length
590 amino acids
Sequence
(BLAST)
(BLAST)
001: MRYEMGVSIL TRFHFSLPLP RATARKRIFH FCPPIACRSS MDQSSGLNLE DLKWDHSFVR ELPGDPRRDS FPREVLHACY TQVSPSVQVH NPQLVAFSQP
101: VADLLDLDHK EFQRPDFPLF FSGATPLVGA LPYAQCYGGH QFGMWAGQLG DGRAMTLGEI LNSNSERWEL QLKGAGKTPY SRFADGLAVL RSSVREFLCS
201: EAMHHLGIPT TRALSLVTTG NLVTRDMFYD GNPKEEPGAI VCRVAQSFLR FGSYQIHASR SDEDLGLVRV LADYAIRHHF PHIQNMSKSD SLSFCTGDED
301: HSVVDLTSNK YAAWVVEIAE RTASLIARWQ GVGFTHGVLN TDNMSILGLT IDYGPFGFLD AFDPKFTPNT TDLPGRRYCF ANQPDIGLWN IAQFTTTLQA
401: AHLINEKEAN YAMERYGTRF MDDYQVTMTK KLGLPKYNKQ MINKLLSNMA VDKVDYTNFF RTLSNVKADI NIPDDELLVP LKSVLLDIGK ERKEAWTSWL
501: KAYIHEVSTS GIPDDERKIS MDSVNPKYIL RNYLCQTAID AAEIGDFGEV RSLLKLVEHP YDEQPGMEKY ARLPPAWAYR PGVCMLSCSS
101: VADLLDLDHK EFQRPDFPLF FSGATPLVGA LPYAQCYGGH QFGMWAGQLG DGRAMTLGEI LNSNSERWEL QLKGAGKTPY SRFADGLAVL RSSVREFLCS
201: EAMHHLGIPT TRALSLVTTG NLVTRDMFYD GNPKEEPGAI VCRVAQSFLR FGSYQIHASR SDEDLGLVRV LADYAIRHHF PHIQNMSKSD SLSFCTGDED
301: HSVVDLTSNK YAAWVVEIAE RTASLIARWQ GVGFTHGVLN TDNMSILGLT IDYGPFGFLD AFDPKFTPNT TDLPGRRYCF ANQPDIGLWN IAQFTTTLQA
401: AHLINEKEAN YAMERYGTRF MDDYQVTMTK KLGLPKYNKQ MINKLLSNMA VDKVDYTNFF RTLSNVKADI NIPDDELLVP LKSVLLDIGK ERKEAWTSWL
501: KAYIHEVSTS GIPDDERKIS MDSVNPKYIL RNYLCQTAID AAEIGDFGEV RSLLKLVEHP YDEQPGMEKY ARLPPAWAYR PGVCMLSCSS
001: MLLRVCCPSS FFYLRPLHLF SSTAKVPFCP SLPRQFRLSP SRSSSFRRME SSPASSSSPT PVTDSSADSL AKDLQNQSLG AVDEGVKIKK KLEDFNWDHS
101: FVKELPGDPR TDVISREVLH ACYSKVSPSV EVDDPQLVAW SVSVAELLDL DPKEFERPDF PLMLSGAKPL PGAMSYAQCY GGHQFGMWAG QLGDGRAITL
201: GEVLNSKGER WELQLKGAGR TPYSRFADGL AVLRSSIREF LCSETMHCLG IPTTRALCLL TTGQNVTRDM FYDGNPKEEP GAIVCRVSQS FLRFGSYQIH
301: ASRGKEDLDI VRKLADYAIK HHFPHIESMD RSDSLSFKTG DEDDSVVDLT SNKYAAWIVE IAERTATLVA RWQGVGFTHG VLNTDNMSIL GQTIDYGPFG
401: FLDAFDPSYT PNTTDLPGRR YCFANQPDIG LWNIAQFSKT LAVAQLINQK EANYAMERYG DKFMDEYQAI MSKKLGLTKY NKEVISKLLN NMSVDKVDYT
501: NFFRLLANVK ANPNTPENEL LKPLKAVLLD IGKERKEAWI KWMRSYIQEV GGSEVSDEER KARMDSVNPK YILRNYLCQS AIDAAEQGDF SEVNNLIRLM
601: KRPYEEQPGM EKYARLPPAW AYRPGVCMLS CSS
101: FVKELPGDPR TDVISREVLH ACYSKVSPSV EVDDPQLVAW SVSVAELLDL DPKEFERPDF PLMLSGAKPL PGAMSYAQCY GGHQFGMWAG QLGDGRAITL
201: GEVLNSKGER WELQLKGAGR TPYSRFADGL AVLRSSIREF LCSETMHCLG IPTTRALCLL TTGQNVTRDM FYDGNPKEEP GAIVCRVSQS FLRFGSYQIH
301: ASRGKEDLDI VRKLADYAIK HHFPHIESMD RSDSLSFKTG DEDDSVVDLT SNKYAAWIVE IAERTATLVA RWQGVGFTHG VLNTDNMSIL GQTIDYGPFG
401: FLDAFDPSYT PNTTDLPGRR YCFANQPDIG LWNIAQFSKT LAVAQLINQK EANYAMERYG DKFMDEYQAI MSKKLGLTKY NKEVISKLLN NMSVDKVDYT
501: NFFRLLANVK ANPNTPENEL LKPLKAVLLD IGKERKEAWI KWMRSYIQEV GGSEVSDEER KARMDSVNPK YILRNYLCQS AIDAAEQGDF SEVNNLIRLM
601: KRPYEEQPGM EKYARLPPAW AYRPGVCMLS CSS
Arabidopsis Description
Selenoprotein O [Source:UniProtKB/TrEMBL;Acc:Q8H126]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.